Part of scaffold_118 (Scaffold)

For more information consult the page for scaffold_118 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MMP19 ENSTTRG00000009752 (Bottlenosed dolphin)

Gene Details

matrix metallopeptidase 19

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009243, Bottlenosed dolphin)

Protein Percentage 97.04%
cDNA percentage 97.96%
Ka/Ks Ratio 0.39462 (Ka = 0.0146, Ks = 0.037)

MMP19 ENSBTAG00000009051 (Cow)

Gene Details

matrix metalloproteinase-19 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011924, Cow)

Protein Percentage 91.73%
cDNA percentage 91.87%
Ka/Ks Ratio 0.18012 (Ka = 0.0421, Ks = 0.2335)

MMP19  (Minke Whale)

Gene Details

matrix metallopeptidase 19

External Links

Gene match (Identifier: BACU008119, Minke Whale)

Protein Percentage 97.59%
cDNA percentage 98.95%
Ka/Ks Ratio 1.27811 (Ka = 0.0109, Ks = 0.0085)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1620 bp    Location:1820266..1825886   Strand:+
>bmy_03943
ATGAACTGGCAGCGGCTGTGGCTGGGCTTCCTACTCCCCATGACAGTCTCGTGCTGGGCCCTGGGGCCTGGAGAGGAGGCAGCAGTGGATTACTTGTTGMAATACGGGTACCTACAGAAGCCTCTAGAAGGACCTGATGACTTCAGGCCAGAAGATATCATAGAGGCTCTGAGAGCTTTTCAGGAAGCATCTGAGCTGCCAGTCTCAGGTCAGCTAGATGATGCCACGAGGGCCCATATGAGGCAGCCCCGTTGTGGTCTGGAGGACCCCTTCAACCAGAAGACCCTTAAATACCTGCTGCTGGGCCGCTGGAGAAAGAAGCACCTGACCTTCCGCATCTTGAACCTGCCCTCCACCCTCCCATCCTCCACAGCCCGGGCAGCCCTGTTTCAAGCCTTCCAGTACTGGAGCAATGTGGCTCCCTTGACCTTCCGGGAGGTGAAGGCTGGCTGGGCTGATATCCGCCTCTCCTTCCATGGCCGCCAAAGCCCATACTGCTCCAATACCTTTGATGGGCCTGGGCGGGTCCTGGCCCATGCCGACATCCCAGAGCTGGGCAGTGTGCACTTTGATGAAGATGAGCTCTGGACTGAGGAGACCTACCGGGGGGTGAACCTGCGCATCATTGCAGCCCACGAACTGGGCCATGCCCTGGGGCTTGGGCACTCCCGATACACCCAGGCCCTCATGGCCCCTGTCTATGCTGGCTACCGGCCCCACTTCAAGCTGCACCCGGATGATGTGGCTGGGATCCAGGCTCTCTATGGCAAGAAAAGCCCAGAGACAGAGGATGAGGAAGAAGAGACGGAGCTCCCCACTGTACCCCAAGTGCCCACAGAACCCAGTCCCATGCCAGACCCCTGCAGTGGTGAACTGGATGCCATGATGCTGGGGCCCCGAGGGAAGACCTACGCTTTCAAGGGAAACTACGTGTGGACCGTGACAGATTCAGGGCTGGGTCCCTTGTTCCAAGTGTCTGCCCTTTGGGAGGGGCTCCCAGGAAACCTGGATGCTGCTGTCTACTCTCCTCGGACGCAATGGATTCACTTCTTTAAGGGAGACAAGGTGTGGCGCTACGTTAATTTCAAGATGTCTCCTGGCTTCCCCAAGAAGCTGAATAGGGTAGGACCCAACCTGGATGCTGCTCTCTATTGGCCTCTCAACAAAAAGGTGTTCCTCTTTAAGGGCTCCGGTTACTGGCAGTGGGACGAACTGGCCCAAACTGATTTCAGCCGCTACCCCAAACCAACCAAGGGGTTGTTTACAGGAGTGCCAGACCAGCCCTCAGGCGCCATGAGTTGGCGGGATGGCCGCGTCTACTTCTTTAAGGGCAAACAGTACTGGCGCCTCAATCGGCAGCTTCGAGTAGAGAAAGGCTATCCCAGAGATATCGCCCACAACTGGATGCACTGTCGTCCCCAGACCCCAGACACCACCCCTTCAGATGGGGACACCGCTTCCTCAGCCACAGGAACAACCTTGGATACCACTTCCTTGGCCATAGATATCACTTTGCACACTGACCGCTCAGCCGGAGATACGATCTTGGACATTACCCCCTTAGCCACAGCCTCCACCGCCCTTTTATTCCCTGGTAACGTCACCCTCCCAGAAATCTAA

Related Sequences

bmy_03943T0 Protein

Length: 540 aa      View alignments
>bmy_03943T0
MNWQRLWLGFLLPMTVSCWALGPGEEAAVDYLLXYGYLQKPLEGPDDFRPEDIIEALRAFQEASELPVSGQLDDATRAHMRQPRCGLEDPFNQKTLKYLLLGRWRKKHLTFRILNLPSTLPSSTARAALFQAFQYWSNVAPLTFREVKAGWADIRLSFHGRQSPYCSNTFDGPGRVLAHADIPELGSVHFDEDELWTEETYRGVNLRIIAAHELGHALGLGHSRYTQALMAPVYAGYRPHFKLHPDDVAGIQALYGKKSPETEDEEEETELPTVPQVPTEPSPMPDPCSGELDAMMLGPRGKTYAFKGNYVWTVTDSGLGPLFQVSALWEGLPGNLDAAVYSPRTQWIHFFKGDKVWRYVNFKMSPGFPKKLNRVGPNLDAALYWPLNKKVFLFKGSGYWQWDELAQTDFSRYPKPTKGLFTGVPDQPSGAMSWRDGRVYFFKGKQYWRLNRQLRVEKGYPRDIAHNWMHCRPQTPDTTPSDGDTASSATGTTLDTTSLAIDITLHTDRSAGDTILDITPLATASTALLFPGNVTLPEI*