Part of scaffold_118 (Scaffold)

For more information consult the page for scaffold_118 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RDH5 ENSTTRG00000009716 (Bottlenosed dolphin)

Gene Details

retinol dehydrogenase 5 (11-cis/9-cis)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009195, Bottlenosed dolphin)

Protein Percentage 98.21%
cDNA percentage 98.51%
Ka/Ks Ratio 0.24251 (Ka = 0.0084, Ks = 0.0345)

RDH5 ENSBTAG00000011927 (Cow)

Gene Details

11-cis retinol dehydrogenase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000056512, Cow)

Protein Percentage 93.5%
cDNA percentage 92.14%
Ka/Ks Ratio 0.1216 (Ka = 0.0315, Ks = 0.2592)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 741 bp    Location:1926241..1923128   Strand:-
>bmy_03952
ATGTGGCTGCCTCTGCTTCTGGGAGTCTCGCTCTGGGCAGCACTGTGGTTGCTCAGGGACCGGCAGAGCCTGCCCGCCAGCGATGCTTTCGTCTTTGTCACCGGCTGTGACTCGGGCTTTGGGCGGCTTCTGGCACTGAGACTGGACCAGAGAGGCTTCCGAGTCCTGGCCAGCTGCCTGACCCCCTCAGGGGCAGAGGACCTCGAGCGGGTGGCCTCCTCCCGACTCCACACCACCCTGCTGGATGTCACAGATCCCCAGAGCGTCCGGCAGGCAGCCAAGTGGGTGGAAACACACGTCGGGGAAGCAGGGCTTTTTGGTCTGGTGAATAATGCTGGCATGGCTGGCATCATCGGGCCCACACCTTGGCAGACACAGGAGGATTTCCAGCGGGTGCTGAATGTGAACACACTGGGTCCCATCGGGGTCACCCTCGCCCTGCTGCCCCTGCTGCGGCAGGCCCAGGGCCGGGTGATCAACATCACCAGTGTCCTGGGCCGCCTGGCAGCCAGTGGAGGGGGCTACTGTGTCTCCAAGTTTGGCCTGGAGGCGTTCTCTGACAGCCTGAGGCGGGACGTGGCTCCTTTCGGGGTACGAGTCTCTATCGTGGAGCCTGGCTTCTTCAGAACCCCTGTGACAAACCTGGAAAGTCTGGAGGACAACCTGCAGGCCTGCTGGGCACGGCTGCCTCCTGCCACACAGGCCCTCTATGGGGAGACCTTCCTCACCAAGTGTGAGTGA

Related Sequences

bmy_03952T0 Protein

Length: 247 aa      View alignments
>bmy_03952T0
MWLPLLLGVSLWAALWLLRDRQSLPASDAFVFVTGCDSGFGRLLALRLDQRGFRVLASCLTPSGAEDLERVASSRLHTTLLDVTDPQSVRQAAKWVETHVGEAGLFGLVNNAGMAGIIGPTPWQTQEDFQRVLNVNTLGPIGVTLALLPLLRQAQGRVINITSVLGRLAASGGGYCVSKFGLEAFSDSLRRDVAPFGVRVSIVEPGFFRTPVTNLESLEDNLQACWARLPPATQALYGETFLTKCE*