Part of scaffold_118 (Scaffold)

For more information consult the page for scaffold_118 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ITGA7 ENSTTRG00000009650 (Bottlenosed dolphin)

Gene Details

integrin, alpha 7

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009172, Bottlenosed dolphin)

Protein Percentage 85.51%
cDNA percentage 85.31%
Ka/Ks Ratio 0.13867 (Ka = 0.0093, Ks = 0.0673)

ITGA7 ENSBTAG00000012897 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017145, Cow)

Protein Percentage 77.87%
cDNA percentage 79.51%
Ka/Ks Ratio 0.31771 (Ka = 0.1773, Ks = 0.5581)

ITGA7  (Minke Whale)

Gene Details

integrin, alpha 7

External Links

Gene match (Identifier: BACU008112, Minke Whale)

Protein Percentage 99.75%
cDNA percentage 99.41%
Ka/Ks Ratio 0.05757 (Ka = 0.0011, Ks = 0.02)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3861 bp    Location:1937092..1958959   Strand:+
>bmy_03954
GGAGCCGGAGTGGACCAGGGGTTGCGGCCGCTGCAGTTGTCCTGGCTGGTGCTGGGGTGGCGGAGCGGCGGGAGAGGGGTGGCGAGGCGGAAGACTGGGAGACCCCCTGAAGGACCAGCGAGACTCGGAGATCAGAGACCCGCCCCGGGAGACCTGGGACTCGGGGCGCGAGCGGATTTCCTTGCGCTCTCCCGGAGCACGCGCGGGGGTCGCCCCATGGCAGGGACTCCGGGCCGCGATCCATGGGGGGCCCCTGGGATTTGTTACCTTCTTGGCTCCCTGCTTGCCGGACTGCTCTTCCCAGGGGCTGTCGCCTTCAATCTGGACGTGATGGGCGCCCTGCGCAAGGAGGGCGAGCCAGGGAGCCTCTTCGGCTTCTCTGTGGCTCTGCATCGCCAGTTGCAGCCCGGACCCCAAAGCTGGCTGCTGGTGGGCGCTCCCCAGGCTCTGGCCCTGCCTGGGCAGCAGGCGAATCGCACTGGAGGCCTCTTCGCTTGCCCACTGAGCCTGGAAGAGACTGACTGCTACAGAGTGGACATCGACCGGGGAGGTGAGGGCCCTGTGGGGGTGGGGTGGGGGGCACAGGAGGAGGGGAGGGGAGGACTTGGCTTCCTCTTTCCTCCCCTAATTCCCAGTGTCCCGCCTCCAGCTGACGTGCAGAAGGAGAGTAAGGAGAACCAGTGGTTGGGAGTCAGTGTTCGGAGCCAGGGACCTGGGGGCAAGATTGTTACCTGTGCGCACCGATACGAGGCGCGGCAGCGTGTGGACCAGATCCTGGAGACGAGGGATGTGATTGGTCGCTGCTTTGTGCTAAGCCAGGACCTGGCCATCCGCGATGAGCTGGATGGCGGGGAGTGGAAGTTCTGTGAGGGACGCCCCCAGGGCCACGAACAATTTGGGTTCTGCCAGCAGGGCACGGCCGCCGCCTTCTCCCCCGACAGCCACTACCTCCTCTTTGGGGCCCCGGGAACCTATAACTGGAAGGGCACGGCCAGGGTGGAGCTCTGTGTGCAGGGCTCAGCGGACCTGGCACATCTGGACGACGGGCCCTACGAGGCGGGGGGTGAGAAGGAGCAGGACCCCCGCCTCATCCCGGTCCCTGCCAACAGCTACTTTGGGTTGCTCTTTGTGACCAACATTGATAGCTCAGACCCTGACCAGCTGGTGTATAAAACTTTGGACCCTGCTGACCGGCTCCCAGGACCAGCCGGAGACTTGGCCCTGAATAGCTACTTAGGTTTCTCCATCGACTCGGGGAAGAGTCTGGTGCGAGCAGAGGAGCTGAGCTTTGTGGCAGGGGCCCCCCGTGCCAACCACAAGGGTGCTGTGGTCATTCTGCGCAAAGACAGCGCCAGTCGCCTGGTGCCTGAAGTTATGCTGTCCGGGGAGCGCCTGACCTCTGGCTTTGGCTACTCGCTGGCGGTGGCTGATCTTAACAATGACGGCTGGACAGATCTGGTAGTGGGTGCCCCTTACTACTTCGAGCGCCAAGAAGAACTGGGGGGTGCCGTGTATGTGTACATGAACCAGGGAGGTCACTGGGCTGGGGTCTCCCCTCTCCGGCTCTGCGGCTCTCCTGACTCCATGTTCGGGATCAGTCTGGCTGTCCTGGGGGACCTCAACCAAGATGGCTTCCCAGACCTTGCTGTAGGGGCTCCCTTCGATGGGGATGGGAAAGTCTTTATCTACCACGGGAGCAGCCTGGGGGTTGTCGTCAAACCTTCCCAGGTGCTGGAGGGCGAGGCTGTGGGCATTAAGAGCTTTGGCTACTCTCTGTCGGGCGGCCTGGATGTGGATGGGAACCGCTACCCGGACCTGCTGGTGGGCTCCCTGGCCGACACTGCCGTGCTCTTCAGGGCCAGGCCCGTCCTCCACGTCTCCCACGAGGTCTCTATTCTTCCAAGAAACATCGACCTAGAACAGCCCAACTGCGCCAGTGGCCACTCGGTCTGCATGGACCTCAGGGTCTGTTTCAGCTACATTGCATCGCCCAGCAGCTACAGCCCCGTTGTGGCCCTGGATTACACGTTAGATGGGGACACAGACCGGAGGCTCCGGGGCCAGGTGCCCCGTGTGACCTTCCTGAGCCGTGGCCCGGATGACCCCAAGCACCAGGCCTCAGGCACCGTGTGGCTGAAACACCAGCATGACCGAGTCTGTGGAGACACTATGCTTCAGCTTCAGGAGAATGTCAAAGACAAGCTTCGGGCCATCGTGGTGACTCTGTCCTATAGTCTCCAGACCCCTCGGCTCCGGCGACAGGCTCCTGGCCAGGGGCTGCCCCCCGTGGCCCCCATCCTCAATGCCCACCAGCCCAGCACCCAGCGGACAGAGATCCACTTTCTGAAGCAAGGCTGTGGTGAAGACAAGGTGTGTCAGAGCAATCTGCAGCTGGTCCACGCCCGGTTCTGCGCCCGTGTCAGCGACACGGAGTTTCAGCCTCTGCCCATGGATGCGGATGGGACGACAGCCCTGTTTGCACTGAGTGGGCAGCCAGTCATCGGCCTGGAGCTGAAGGTCACCAATCTGCCTTCGGACCCAGCCCAGCCCCAGGCTGATGGGGATGACGCCCATGAAGCCCAGCTCCTGGTCACCCTCCCTGCCTCTCTGCACTATTCAGGAGTCCGGGCCCTGGACCCTGCGGAGAAGCCGCTGTGCCTGTCCAATGAGAATGCCTCCCATGTTGAGTGTGAGCTGGGGAACCCCATGAAGAGAGGTGCCCAGGTCACCTTCTACCTCATCCTTAGCACCTCAGGGTTCACCATTGAGACCACAGAGCTGGAGGTGGAGCTGCTGTTGGCCACGATCAGCGAGCAGGAGCTGCAGCCGGTCTCTGCCCGAGCCCGTGTCTTCATCGAGCTGCCACTGTCCATCACGGGGGTGGCCATTCCCCAGCAGCTCTTCTTCTCCGGCGTGGTGCGGGGCGAGAGCGCCATGCAGTCTGAGCGGGATGTGGGCAGCAAGGTCAAGTATGAGGTTACGGTCTCCAACCAAGGCCAGTCACTCAATACCCTGGGCTCGGCCTTCCTCAACATCATGTGGCCCCACGAGATTGCCAACGGGAAGTGGCTGCTGTACCCCATGCGGGTGGAGCTGGAGGGCGGGCAGGGGCCGGGGCAGAGGGGACTCTGTTCCCCCAGGCCCAACATCCTCCACCTGGATGTGGACAGCAGGGACAGGAGGCGGCGGGAGCTGGGGCAGCCGGAGCTGCAGGAGCCTCAGGAGCAGCCGGAGCCCAGCACGTCCTGGTGGCCAGTGTCCTCTGCTGAGAAGAAGAAAAACGTCACCCTGGACTGCACCCGGGGCACGGCYAGCTGCGTGGTGTTCAGCTGCCCTCTCTACAGCTTCGACCGTGCAGCTGTGCTGCATGTCTGGGGCCGCCTCTGGAACAGCACCTTCCTGGAGGAGTACTCGGCTGTGAAGTCCCTGGAAGTGATTGTCCAAGCCAACATCACCGTGAAGTCCTCCATCAAGAACTTGCTGCTCAGAGATGCCTCCACAGTGATCCCAGTGATGGTGTACCTGGACCCCGTGGCTGTGGTGGCAGAAGGAGTCCCCTGGTGGGTCATCCTTCTGGCTGTACTGGCCGGGCTGCTGGTGCTGGCGCTGCTGGTGCTGCTCATGTGGAAGATGGGATTCTTCAAGCGAGCGCGGTACCCCGAAGCCACTGTGCCCCAGTACCACGCGGTGAAGATCCCACGGGAAGACCGGCAGCAGTTCAAGGAGGAGAAGACGGGCACCATCCTGAGGAACAACTGGGGCAGCCCCCGGCGGGAGGGCCCCGATGCACACCCCATCCTGGCTGGGGATGGGCACCCGGAGCTGGGCTCCGATGGGCACCCTGTGCCAGGCACTGCCTAG

Related Sequences

bmy_03954T0 Protein

Length: 1287 aa      View alignments
>bmy_03954T0
GAGVDQGLRPLQLSWLVLGWRSGGRGVARRKTGRPPEGPARLGDQRPAPGDLGLGARADFLALSRSTRGGRPMAGTPGRDPWGAPGICYLLGSLLAGLLFPGAVAFNLDVMGALRKEGEPGSLFGFSVALHRQLQPGPQSWLLVGAPQALALPGQQANRTGGLFACPLSLEETDCYRVDIDRGGEGPVGVGWGAQEEGRGGLGFLFPPLIPSVPPPADVQKESKENQWLGVSVRSQGPGGKIVTCAHRYEARQRVDQILETRDVIGRCFVLSQDLAIRDELDGGEWKFCEGRPQGHEQFGFCQQGTAAAFSPDSHYLLFGAPGTYNWKGTARVELCVQGSADLAHLDDGPYEAGGEKEQDPRLIPVPANSYFGLLFVTNIDSSDPDQLVYKTLDPADRLPGPAGDLALNSYLGFSIDSGKSLVRAEELSFVAGAPRANHKGAVVILRKDSASRLVPEVMLSGERLTSGFGYSLAVADLNNDGWTDLVVGAPYYFERQEELGGAVYVYMNQGGHWAGVSPLRLCGSPDSMFGISLAVLGDLNQDGFPDLAVGAPFDGDGKVFIYHGSSLGVVVKPSQVLEGEAVGIKSFGYSLSGGLDVDGNRYPDLLVGSLADTAVLFRARPVLHVSHEVSILPRNIDLEQPNCASGHSVCMDLRVCFSYIASPSSYSPVVALDYTLDGDTDRRLRGQVPRVTFLSRGPDDPKHQASGTVWLKHQHDRVCGDTMLQLQENVKDKLRAIVVTLSYSLQTPRLRRQAPGQGLPPVAPILNAHQPSTQRTEIHFLKQGCGEDKVCQSNLQLVHARFCARVSDTEFQPLPMDADGTTALFALSGQPVIGLELKVTNLPSDPAQPQADGDDAHEAQLLVTLPASLHYSGVRALDPAEKPLCLSNENASHVECELGNPMKRGAQVTFYLILSTSGFTIETTELEVELLLATISEQELQPVSARARVFIELPLSITGVAIPQQLFFSGVVRGESAMQSERDVGSKVKYEVTVSNQGQSLNTLGSAFLNIMWPHEIANGKWLLYPMRVELEGGQGPGQRGLCSPRPNILHLDVDSRDRRRRELGQPELQEPQEQPEPSTSWWPVSSAEKKKNVTLDCTRGTASCVVFSCPLYSFDRAAVLHVWGRLWNSTFLEEYSAVKSLEVIVQANITVKSSIKNLLLRDASTVIPVMVYLDPVAVVAEGVPWWVILLAVLAGLLVLALLVLLMWKMGFFKRARYPEATVPQYHAVKIPREDRQQFKEEKTGTILRNNWGSPRREGPDAHPILAGDGHPELGSDGHPVPGTA*