Part of scaffold_122 (Scaffold)

For more information consult the page for scaffold_122 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLUL1 ENSTTRG00000016668 (Bottlenosed dolphin)

Gene Details

clusterin-like 1 (retinal)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015803, Bottlenosed dolphin)

Protein Percentage 89.34%
cDNA percentage 92.58%
Ka/Ks Ratio 0.35874 (Ka = 0.0578, Ks = 0.1612)

CLUL1 ENSBTAG00000014012 (Cow)

Gene Details

clusterin-like protein 1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018616, Cow)

Protein Percentage 85.42%
cDNA percentage 89.7%
Ka/Ks Ratio 0.38798 (Ka = 0.077, Ks = 0.1985)

CLUL1  (Minke Whale)

Gene Details

clusterin-like 1 (retinal)

External Links

Gene match (Identifier: BACU014678, Minke Whale)

Protein Percentage 21.81%
cDNA percentage 36.7%
Ka/Ks Ratio 0.09096 (Ka = 1.1617, Ks = 12.7705)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1128 bp    Location:733748..713629   Strand:-
>bmy_03988
ATGGCCTGCTTGGACTTGGCCTGGGCGGCCATGGGGCCCGTTTTGGGCCAGTCACTCTCAGCCATCGCGGGGCAGGCGGGGCAGGTGGTCCGTCCGGCGGCTCTGAGGCAGCTGCTCGAGACCCGGCGACGCGACTTGCTTGAGATCCTATTCTGCAATGTGCTATTATTATTATGCATGATTGTATCCATGCTCCTGAAAGAGTTGGGAGGGACTTCTGCCAGAGTAACACTCTCTCCCAAGCGGGATCACAGCGGAAACATGAAGCTGCCACTCTTGGTGTTTATTGTGTATCTGCTGTGGTTGAAAGATTGTCACTGTGCACCTACTTGGAAGGACAAAACTGCTATCCATGGAGACCTGAAGGGTTTTTCCAAGGCTGGGGAGATAGATATAGATGAAGAGGTGAAGAAGGCTTTGACTGGCATGAAGCAAATGAAAATCCTGATGGAAAGAAGAGAGGAGGAACATAGCAACCTAATGAGAACCCTGAAGAAATGCAGAGAAGAAAAGCAGGAGGCCCTGAAACTTATGAATGAAGTTCAAGAACATCTAGAAGAGGAAGAAAGGCTATGCCAGRTGTCTTTGACAGATTCCTGGGATGAATGCAAATCTTGCCTGGAAAGTAACTGCATGAGATTTTATACAACCTGCCAAAACAGTTGGTCCTCTATGAAAAACAAGCTTGAACATTTTTTCAGGAAGATATATCAGTTTCTGTTTCCTTTCCATGAAGATAATGAAAAAGACCTTCCCATYGGTGAGAAGTTCGTTGAGGAAGATGCACAACTGACCCAGATAGAGAACATGTTCAGCCAACTGRCTGTGGATGTGGGATTTCTCTATAATAGGAGTTTTGACGTCTTCAAACAGATGCAGCAAGAATTTGACCAGGCTTTTCAATCATATTTCATGTCAGATACAGACTTCATGGAGCCTTACTTTTTTCCAGSTTTTTCCAAAGAGCCAGCAAAAAAAGCACATCCTGTGCAAAGCTGGGACATTCCCAGCTTCTTCCAGCTGTTTTGTAATTTCAGTCTCTCTATTTATCAAAGTGTCAGTGCAACAGTTACTGAGATGCTGAAGGCAATCGAGGATTTATCAAAACAAGACAAAGGCAAGTATTAA

Related Sequences

bmy_03988T0 Protein

Length: 376 aa      View alignments
>bmy_03988T0
MACLDLAWAAMGPVLGQSLSAIAGQAGQVVRPAALRQLLETRRRDLLEILFCNVLLLLCMIVSMLLKELGGTSARVTLSPKRDHSGNMKLPLLVFIVYLLWLKDCHCAPTWKDKTAIHGDLKGFSKAGEIDIDEEVKKALTGMKQMKILMERREEEHSNLMRTLKKCREEKQEALKLMNEVQEHLEEEERLCQXSLTDSWDECKSCLESNCMRFYTTCQNSWSSMKNKLEHFFRKIYQFLFPFHEDNEKDLPIGEKFVEEDAQLTQIENMFSQLXVDVGFLYNRSFDVFKQMQQEFDQAFQSYFMSDTDFMEPYFFPXFSKEPAKKAHPVQSWDIPSFFQLFCNFSLSIYQSVSATVTEMLKAIEDLSKQDKGKY*