Sequence detailsbmy_03991 (Coding sequence)

Part of scaffold_122 (SequenceType object (1))

For more information consult the page for scaffold_122 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

COLEC12ENSTTRG00000016666 (Bottlenosed dolphin)

Gene Details

collectin sub-family member 12

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000015801, Bottlenosed dolphin)

Protein Percentage 96.68%
cDNA percentage 96.68%
Ka/Ks Ratio 0.52936 (Ka = 0.0285, Ks = 0.0538)

COLEC12ENSBTAG00000007705 (Cow)

Gene Details

Collectin-12

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000044662, Cow)

Protein Percentage 95.27%
cDNA percentage 91.02%
Ka/Ks Ratio 0.09581 (Ka = 0.0332, Ks = 0.3463)

COLEC12 (Minke Whale)

Gene Details

collectin sub-family member 12

External Links

Gene match (Identifier: BACU014675, Minke Whale)

Protein Percentage 97.39%
cDNA percentage 97.87%
Ka/Ks Ratio 0.47852 (Ka = 0.0177, Ks = 0.0369)

Additional orthologs identified in other species via the OPTIC pipeline.

COLEC12 (Human)   Colec12 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1269 bp    Location:962982..977322   Strand:+
Raw sequence 
>bmy_03991
ATGTCCAGTGGCAAACACAGCGCCAGCACGCATGGTATTCAGGAAGGAACACAATGTACCAAATGTAAAAATAACTGGGCACTGAAGTTTTCTATCATATTATTATACATTTTGTGTGCCTTGTTAACAATCACAGTAGCCATTTTGGGATACAAAGTTGTAGAGAAAATGGACAGTGTTACAGGTGGCATGGAGACATCTCGCCAAACCTATGATGACAAGCTCACAGCAGTGGAAAGCGACCTGAAAAAATTAGGGGACCAAACTGGGAAGAAAGCTCTCAGCACCAACTCAGAACTCTCCACCTTCAGGTCAGACATTCTGGATCTTCGTCAGCAACTTCGTGAGATTACAGAAAAGACTAGCAAGAACAAAGATATGCTGGAGAAGTTACAGGTGAGCGGGGATGCGCTGGTGGACCAGCAGAGTCAACTGAAAGAAACTTTGGAGAATAACTCCTTCCTCATCACCACTGTAAACAAAACCCTCCAGGCATATAACGGCTATGTCACAAATCTGCAGCAAGACACGAGTGTGCTGCAGGGCAACCTGCAGAGCCAGATGTATTCTCACAACGTGGTCATCATGAACCTCAACAACCTGAACCTGACCCAGGTGCAGCAAAGGAACCTCATCACAAATCTGCAGCGCTCTTTGGATGACACAAGCCAGGCAATCCAGCGAATCAAGAATGACTTCCAAAACCTGCAGCAGGTTTTCTTTCAAGCCAAGAAGGACACAGATTGGCTGAAGGAGAAAGTGCAGAGCTTGCAGACGCTGGCTGCCAATAACTCTGCCTTGGCCAAAGCCAACAATGACACCCTGGAGGACATGAACAGCCAGCTCAGCTCCTTTGCAGGGCAGATGGACAACATCACTACGGCCTCCCAAGCCAATGAGCAGAACCTGAAAGATCTGCAGGATGTACACAGGGATGCGGAGAACAGAACGGCTGTCAAGTTCAGCCAGCTGGAGGAGCGCTTCCAGCTCTTTGAGACCGACATTGTGAACATCATTAGCAACATTAGCTACACAGCCCACTACCTACGGACACTGACCAGCAACCTGAATGAAGTCAGGACCACGTGCACGGATACGCTGACCAAACACACGGATGATCTGACCTCCTTGAATAACACACTGGCCAACATCCGTTTAGATTCTGTTTCTCTCAGGATGCAACAAGATTTGATGAGGTCGAGGTTGGACACTGAAGTGGCCAACTTATCAGTGATTATGGAAGAAATGAAGCTGGTGGACTCCAAGCAT

Related Sequences

bmy_03991T0 SequenceType object (3)

Length: 423 aa      View alignments
>bmy_03991T0
MSSGKHSASTHGIQEGTQCTKCKNNWALKFSIILLYILCALLTITVAILGYKVVEKMDSVTGGMETSRQTYDDKLTAVESDLKKLGDQTGKKALSTNSELSTFRSDILDLRQQLREITEKTSKNKDMLEKLQVSGDALVDQQSQLKETLENNSFLITTVNKTLQAYNGYVTNLQQDTSVLQGNLQSQMYSHNVVIMNLNNLNLTQVQQRNLITNLQRSLDDTSQAIQRIKNDFQNLQQVFFQAKKDTDWLKEKVQSLQTLAANNSALAKANNDTLEDMNSQLSSFAGQMDNITTASQANEQNLKDLQDVHRDAENRTAVKFSQLEERFQLFETDIVNIISNISYTAHYLRTLTSNLNEVRTTCTDTLTKHTDDLTSLNNTLANIRLDSVSLRMQQDLMRSRLDTEVANLSVIMEEMKLVDSKH