Sequence detailsbmy_04007 (Coding sequence)

Part of scaffold_122 (SequenceType object (1))

For more information consult the page for scaffold_122 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MIB1ENSTTRG00000002632 (Bottlenosed dolphin)

Gene Details

mindbomb E3 ubiquitin protein ligase 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002468, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 99.12%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0328)

MIB1ENSBTAG00000007467 (Cow)

Gene Details

E3 ubiquitin-protein ligase MIB1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000009822, Cow)

Protein Percentage 99.56%
cDNA percentage 94.09%
Ka/Ks Ratio 0.00799 (Ka = 0.002, Ks = 0.256)

MIB1 (Minke Whale)

Gene Details

mindbomb E3 ubiquitin protein ligase 1

External Links

Gene match (Identifier: BACU017867, Minke Whale)

Protein Percentage 95.3%
cDNA percentage 95.9%
Ka/Ks Ratio 0.42811 (Ka = 0.0335, Ks = 0.0782)

Additional orthologs identified in other species via the OPTIC pipeline.

MIB1 (Human)   Mib1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2742 bp    Location:1843151..1961201   Strand:+
Raw sequence 
>bmy_04007
ATGAGTAACTCCAGGAATAACCGGGTGATGGTGGAAGGGGTCGGGGCCCGAGTGGTGCGCGGTCCGGACTGGAAGTGGGGGAAGCAGGACGGCGGCGAGGGCCATGTGGGCACGGTCCGGAGCTTCGAGAGCCCCGAGGAGGTGGTGGTGGTGTGGGACAACGGCACCGCCGCCAACTACCGCTGCTCCGGGGCCTACGACCTGCGTATCCTGGACAGCGCGCCCACGGGCATCAAGCATGATGGAACCATGTGTGATACCTGCCGCCAGCAACCAATCATTGGCATTCGATGGAAATGTGCGGAGTGTACAAATTATGATTTGTGCACAGTTTGTTATCATGGAGATAAACATCATTTAAGGCATCGCTTTTATAGAATTACTACACCAGGAAGTGAGCGGGTTCTGTTAGAGTCTCGTAGAAAATCTAAGAAGATTACAGCCAGAGGGATCTTTGCAGGTGCCAGAGTGGTGCGAGGAGTGGACTGGCAGTGGGAAGACCAGGATGGAGGAAATGGACGCAGGGGAAAGGTAACAGAAATCCAAGACTGGAGTGCATCAAGCCCACATAGCGCGGCCTACGTTCTCTGGGACAATGGTGCTAAGAACCTTTACAGAGTTGGCTTTGAGGGCATGTCTGACCTGAAGTGTGTCCAGGATGCCAAAGGAGGTTCTTTCTACAGAGATCATTGTCCTGTGCTAGGTGAGCAGAATGGCAACAGGAATCCTGGTGGATTGCAGATTGGTGACCTGGTCAATATAGATCTTGACCTAGAAATTGTACAGTCTTTGCAGCACGGTCATGGAGGATGGACTGATGGCATGTTTGAGACTTTAACTACAACTGGAACTGTTTGTGGCATTGATGAAGATCATGACATTGTAGTACAGTATCCCAGTGGCAATAGGTGGACCTTCAATCCTGCTGTTCTCACTAAAGCGAACATTGTCCGAAGTGGGGATGCCGCTCAGGGCGCAGAAGGAGGCCCCTCACAGTTCCAAGTGGGTGATCTTGTACAAGTTTGTTACGACCTGGAAAGAATTAAACTTCTACAGAGAGGACATGGAGAATGGGCTGAAGCTATGCTCCCAGTGAATGGACAGTGTGCTGGTCACACAGCCATGCAAGCTGCTAGTCAGAATGGACATGTTGACATTTTGAAGTTACTTTTGAAGCAAAATGTGGATGTAGAAGCAGAGGATAAAGATGGAGATAGAGCCGTTCACCATGCAGCTTTTGGAGATGAAGGCGCTGTTATAGAAGTGCTGCACCGAGGCAGCGCTGATCTGAATGCACGAAACAAGCGCCGGCAGACACCACTTCATATTGCTGTCAATAAAGGTCACCTTCAAGTGGTGAAGACTTTATTGGACTTTGGCTGTCATCCCAGTCTTCAGGATTCTGAAGGTGATACCCCTCTTCATGATGCAATAAGTAAGAAACGTGATGATATCCTGGCAGTTCTTCTGGAAGCTGGAGCAGATGTTACCATTACAAATAATAATGGATTTAATGCTCTACACCATGCTGCACTAAGAGGAAATCCCAGTGCAATGCGTGTTTTACTGTCGAAATTACCAAGACCGTGGATTGTGGATGAGAAGAAAGATGATGGTTATACTGCCTTGCATCTGGCTGCCCTTAATAATCATGTAGAAGTGGCTGAACTGTTGGTACATCAGGGTAACGCAAACCTGGATATCCAGAATGTGAACCAGCAGACTGCCCTACACCTTGCTGTTGAGCGGCAGCACACCCAGATTGTGAGGCTTTTGGTCCGTGCAGGTGCCAAATTAGATATTCAGGATAAGGATGGGGATACTCCTTTGCATGAAGCTCTGAGGCATCACACTTTGTCTCAGCTACGTCAGCTTCAAGATATGCAAGATGTGGGGAAGGTCGATGCTGCCTGGGAGCCATCCAAAAACACCTTAATAATGGGACTTGGTACCCAGGGAGCCGAGAAGAAGAGTGCAGCATCTATTGCCTGTTTCTTGGCTGCTAATGGTGCTGACCTTAGCATTCGAAATAAGAAGGGTCAGTCGCCACTTGATCTCTGTCCTGATCCAAGTCTCTGCAAAGCTCTGGCAAAGTGTCATAAAGAAAAAGTCAGTGGTCAGGTGGGTTCTCGAAGTCCTTCTATGATTAGTAATGATTCTGAAACCTTAGAAGAGTGTATGGTGTGCTCAGATATGAAGAGAGATACTCTTTTTGGCCCATGTGGACATATTGCTACCTGTTCTTTGTGTTCTCCACGAGTCAAGAAATGCCTCATCTGTAAAGAACAAGTTCAATCCAGGACAAAGATTGAAGAATGTGTGGTATGCTCTGACAAGAAAGCAGCTGTTCTTTTTCAGCCATGCGGACACATGTGTGCTTGTGAGAACTGTGCTAATCTGATGAAAAAGTGTGTGCAGTGTCGGGCAGTAGTTGAACGAAGAGTGCCCTTCATCATGTGTTGTGGAGGGAAAAGTTCAGAGGATGCCACTGATGATATCTCAAGTGGGAATATTCCGGTGTTACAAAAAGATAAGGATAACACCAACGTCAATGCAGACGTGCAGAAGCTGCAGCAGCAGTTACAGGACATTAAAGAGCAGACAATGTGCCCTGTGTGTTTGGATCGTCTGAAGAATATGATTTTCCTTTGTGGCCATGGAACGTGCCAGCTCTGTGGAGACCGAATGAGTGAATGTCCTATTTGTCGAAAGGCTATTGAACGAAGGATTCTTTTGTATTAA

Related Sequences

bmy_04007T0 SequenceType object (3)

Length: 914 aa      View alignments
>bmy_04007T0
MSNSRNNRVMVEGVGARVVRGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANYRCSGAYDLRILDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTVCYHGDKHHLRHRFYRITTPGSERVLLESRRKSKKITARGIFAGARVVRGVDWQWEDQDGGNGRRGKVTEIQDWSASSPHSAAYVLWDNGAKNLYRVGFEGMSDLKCVQDAKGGSFYRDHCPVLGEQNGNRNPGGLQIGDLVNIDLDLEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPSGNRWTFNPAVLTKANIVRSGDAAQGAEGGPSQFQVGDLVQVCYDLERIKLLQRGHGEWAEAMLPVNGQCAGHTAMQAASQNGHVDILKLLLKQNVDVEAEDKDGDRAVHHAAFGDEGAVIEVLHRGSADLNARNKRRQTPLHIAVNKGHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKKRDDILAVLLEAGADVTITNNNGFNALHHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGNANLDIQNVNQQTALHLAVERQHTQIVRLLVRAGAKLDIQDKDGDTPLHEALRHHTLSQLRQLQDMQDVGKVDAAWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLSIRNKKGQSPLDLCPDPSLCKALAKCHKEKVSGQVGSRSPSMISNDSETLEECMVCSDMKRDTLFGPCGHIATCSLCSPRVKKCLICKEQVQSRTKIEECVVCSDKKAAVLFQPCGHMCACENCANLMKKCVQCRAVVERRVPFIMCCGGKSSEDATDDISSGNIPVLQKDKDNTNVNADVQKLQQQLQDIKEQTMCPVCLDRLKNMIFLCGHGTCQLCGDRMSECPICRKAIERRILLY*