Part of scaffold_188 (Scaffold)

For more information consult the page for scaffold_188 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

THEMIS ENSTTRG00000005715 (Bottlenosed dolphin)

Gene Details

thymocyte selection associated

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005397, Bottlenosed dolphin)

Protein Percentage 86.59%
cDNA percentage 88.02%
Ka/Ks Ratio 0.50479 (Ka = 0.0624, Ks = 0.1235)

THEMIS ENSBTAG00000015615 (Cow)

Gene Details

Protein THEMIS

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020742, Cow)

Protein Percentage 81.19%
cDNA percentage 86.91%
Ka/Ks Ratio 0.58897 (Ka = 0.1254, Ks = 0.2129)

THEMIS  (Minke Whale)

Gene Details

thymocyte selection associated

External Links

Gene match (Identifier: BACU019054, Minke Whale)

Protein Percentage 93.23%
cDNA percentage 94.0%
Ka/Ks Ratio 0.44321 (Ka = 0.0492, Ks = 0.111)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1965 bp    Location:1265081..1179869   Strand:-
>bmy_05173
ATGGCCGCCCGAGGAAGGTTAATGCAGGTGCAGCTTCCGTTAGCAGGTAGGAAAATACGCCACGGCGGGACCGGCCTGGAGAGGGAGGGTTGTAAATCCTGGAAGACCAGCTTAGTGAGACGCGTCGGATCGGACGCGGAGGGGGCAGCTCCGAGCTTGGAAGGTTCTATTTATGAAATGTTTGGAAATGAATGCTGTTTGTCAACAGGAGAAGTGATTAAAATTACTGGCCTCAAAATTAAGAAGATCATAGCTGAAATTTGTGAGCACACTGAAGGTTGTGAGTCTCCACAACCATTTGAACTGCCTATGAATTTTCCAGGTACATTACCTCGTATTGTAATTTGGAAAATTGAATTCTATGAACATACTCCTTATGAACAATTTCTCCTAGGTCTTTTTAAGATTGTGGCTGATAAAACTCCGTACCTCACTATGGAAGAAATTACAAGAACCATCCATATTGGACCAAGTAGACTGGGACATCCTTGCTTCTATCATCAGAAGGATATAAAACTAGAGAATCTCATCATAAAGCATGGTGAGCAAATCATGCTCAACTCAGTCGAAGAGATCAATGGAGAAATAATGGTGAACTGTGGTGTGCTAAGGAATCATCAAAATCACTCATTTACTTTGCCTTTGTCACAAGAAGGAGAGTTCTATGAGTGTGATGATGAACATATTTACACCCTAAAGGAAATTGTCCAATGGAAGATCCCCAAGAACAGAACACGAACTGTGAAACTTACAGACTTTTCAAATAAGTGGGACTTAACAAATCCATTCCCTAAAGGCTTTTATGGTGCTGTGATTCTCAAGCCTGTTTATGAAATTCAAGTTAGAAAGGATATAGTCCGTATCCTCCCCAGTTTAGATGTTGAAGTCAAAGACATTACAGACAGTTATGATTCCAACTGGTTTCTTCAGCTGTTATCTACACAAGATCTTTTTGAAATGACCAGTAAAGAGTTCCCCATAGTGGCTGAAGTCATAGAAGCGCCCCAAGGAAACCAGCTACCCAGAAACGTTTTACAACCTGGGAAAACCATTGTGATCCACAAAAAGTGCCAGGCATCAAGGATCTTAGCTTCAGAAATTAGAAGCAATTTTCCTAAAAGACACTTCTTGATCCCCCCTAGCTATAAAGGCAAATTCAARCGGCGACCTCGGGAGTTCCCAACCCCCTATGACCTTGAGATAGCAAAGAGTGAAAAGGAGCCTCTCCACGTGGTGGCCACCAAAGCCTTTCATTCCCCCCATGACGAGCTGTCATCTGTATCTGCCGGGGACCAGTTTCTAGTGCATCACTCAMAGACGACGGAAGTCCTCTGTGAAGGGATCAAAAAAGTGGTGAACGTTCTGGCTTGTGAAAAAATCCTCAAAAAATCCTATGAGGCAGCACTGCTCCCTTTGTACATGGAAGGAGGTTTTGTAGAGGTGATTCATGACAAGAAGCAGTACCAGATTTCCGAGCTCTGTGCACAGTTCCACTTGCCCTTCAATGTGAAGGTTTCTGTGAGAGATCTTTTCACTGAAGAAGACATTTTGGCTGCTACACCAGGACTACGGTTGGAGGAAGCTATCACAGACTCTTATCTACTCATAAGTGACTTTGCCAACCCCAAGGAGTGCTGGGAAATTCCTGCTGGCCGCGTGAATATGACTGTTCAGTTAGTTAATAATTTGTCTGGGGATCCAGGATCATTTCTAGTCAGGACTCTGGTCGAAGAGATCCCTGAAGAACAGTATTATATGATGCGGAGATATGAAAACTCTTTCTCGTACCCCCCACCTCGCCCTCCCAAACATCCCTCCGTGGAGGAAACAAAGTTAAGCCTGCTCAGCTTAGCAGAAGAAAAGACAGTGGGTCTGCCCAAGTCTCCCAAGAGTAGTTGGAGAAAGCTAGAGAAGGTAAAAGGCATTGTGATGAGTGCCAACTGGTTTGCTACTTTGGAGCATTAG

Related Sequences

bmy_05173T0 Protein

Length: 655 aa      View alignments
>bmy_05173T0
MAARGRLMQVQLPLAGRKIRHGGTGLEREGCKSWKTSLVRRVGSDAEGAAPSLEGSIYEMFGNECCLSTGEVIKITGLKIKKIIAEICEHTEGCESPQPFELPMNFPGTLPRIVIWKIEFYEHTPYEQFLLGLFKIVADKTPYLTMEEITRTIHIGPSRLGHPCFYHQKDIKLENLIIKHGEQIMLNSVEEINGEIMVNCGVLRNHQNHSFTLPLSQEGEFYECDDEHIYTLKEIVQWKIPKNRTRTVKLTDFSNKWDLTNPFPKGFYGAVILKPVYEIQVRKDIVRILPSLDVEVKDITDSYDSNWFLQLLSTQDLFEMTSKEFPIVAEVIEAPQGNQLPRNVLQPGKTIVIHKKCQASRILASEIRSNFPKRHFLIPPSYKGKFKRRPREFPTPYDLEIAKSEKEPLHVVATKAFHSPHDELSSVSAGDQFLVHHSXTTEVLCEGIKKVVNVLACEKILKKSYEAALLPLYMEGGFVEVIHDKKQYQISELCAQFHLPFNVKVSVRDLFTEEDILAATPGLRLEEAITDSYLLISDFANPKECWEIPAGRVNMTVQLVNNLSGDPGSFLVRTLVEEIPEEQYYMMRRYENSFSYPPPRPPKHPSVEETKLSLLSLAEEKTVGLPKSPKSSWRKLEKVKGIVMSANWFATLEH*