Part of scaffold_196 (Scaffold)

For more information consult the page for scaffold_196 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CENPO ENSTTRG00000015137 (Bottlenosed dolphin)

Gene Details

centromere protein O

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014350, Bottlenosed dolphin)

Protein Percentage 96.4%
cDNA percentage 98.13%
Ka/Ks Ratio 0.67917 (Ka = 0.0169, Ks = 0.0249)

CENPO ENSBTAG00000015014 (Cow)

Gene Details

Centromere protein O

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000032880, Cow)

Protein Percentage 88.21%
cDNA percentage 90.65%
Ka/Ks Ratio 0.31419 (Ka = 0.0637, Ks = 0.2026)

CENPO  (Minke Whale)

Gene Details

centromere protein O

External Links

Gene match (Identifier: BACU014516, Minke Whale)

Protein Percentage 97.6%
cDNA percentage 98.67%
Ka/Ks Ratio 0.73204 (Ka = 0.0121, Ks = 0.0166)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 753 bp    Location:331520..313813   Strand:-
>bmy_05478
ATGGAGCTGGCGAATACTCTAAGTCAAGACGGCGAGTCCAAAGGAGGTGTTTTAGCTCACTTGGAAAGACTAGAGACTCAAGTGAGCAGATGCCGTAAAAAACTGGAAGAGCCACAGAGTGCACAGGCAGTGGAAAGTGCTCTTGGAACCAGGATTCATGAATTGAGACGTCTGCGAGATAAGCTGAGGGCTGAAGTGAAACAACATCAAGCTAGAGTTAAAGCATCTACTACCAATGTAGAACCCGACCAAACATTAGAGATTACTGAGCAAGAAATTTTGAAGAGAAAACGGGAAAACGTGAAAGCCATTCTGCAGGCATATCGTTTTACAGAGGAGATATCTGCAAAATACTTACAGACTAATATTCAGCACTTCCTGTTCACTCTCTGCGAGTACCTGAATGCTTACTCTGGGAGGAAGTACCAGGCAGATCGACTTCAGAGTGACTTTGCAGCCTTTCTGGCTGGGCCCTTGCAGAGAAACTCACTGTGCAACTTGCTGTCATTTACTTACAAAGCAGAGCCGGAAGGCCAGTCCTTCCCATTTTGTGCTAGACTGCTGTATAAGGACCTCACGACAACTCTTCCAACTGATGTCACTGTTACTTATCAAGGGACGGATGCATTATCCACCACACGGGAAGAACAGCGAGCAGCCCATGAAAATCTGTTTTTTACAAAGCCCCTACATCAAGTGTTTACTTCATTTGCAAGAAAAGGAGACAAGTTGGATATGAGCCTGGTCTCCTAG

Related Sequences

bmy_05478T0 Protein

Length: 251 aa      View alignments
>bmy_05478T0
MELANTLSQDGESKGGVLAHLERLETQVSRCRKKLEEPQSAQAVESALGTRIHELRRLRDKLRAEVKQHQARVKASTTNVEPDQTLEITEQEILKRKRENVKAILQAYRFTEEISAKYLQTNIQHFLFTLCEYLNAYSGRKYQADRLQSDFAAFLAGPLQRNSLCNLLSFTYKAEPEGQSFPFCARLLYKDLTTTLPTDVTVTYQGTDALSTTREEQRAAHENLFFTKPLHQVFTSFARKGDKLDMSLVS*