Part of scaffold_302 (Scaffold)

For more information consult the page for scaffold_302 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HOXD1 ENSTTRG00000002522 (Bottlenosed dolphin)

Gene Details

homeobox D1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002362, Bottlenosed dolphin)

Protein Percentage 50.77%
cDNA percentage 51.9%
Ka/Ks Ratio 0.34284 (Ka = 0.0302, Ks = 0.088)

HOXD1 ENSBTAG00000015840 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021043, Cow)

Protein Percentage 88.82%
cDNA percentage 90.99%
Ka/Ks Ratio 0.16474 (Ka = 0.0521, Ks = 0.3162)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 981 bp    Location:62324..60806   Strand:-
>bmy_07330
ATGAGTTCCTACCTGGACTACGTGTCGTGCGGCAGCGGCAGGGGCGGCGGCGACGTGCTGAGCTTCGCGCCCAAGTTCTGCCGCGCCGACGCTCGGCCAGTGGTCCTGCAGCCCGCCTTCCCCATAGGCAGAGGCGACGGCGCCTTCGTAAGCTGCCTGCCCCTGGCCGCGGCCCGAGCGGCGCCCTCGCCCCCGGCCGCTCCGGAGCAGCCTCCCGCGCCGCCCCCGGCCGCGCCCGCGTACGCGCCGTGCCCCCTGGAGGGGACCTACGAGCCGGGCACGGCACCTGCCGCGGCTGGGGGCGCGGACTACGGTCTCCCGGGGACCGGGCCCCCGTACGACTTCCCGTGCGCGCTCGGGCGGCCGGCCGACGACGGCGGGGCGCACGTCCACTACGCCACCTCGGCTGTCTTCTCGGGCGGCGGCTCCTTCCTCCTCAGCAGCCAGGTGGACTACGCGGCTTTCGGCGAGCCCGCCCCCTTCCCGGCGTGTCTCAAAGAGCCGGCCGACGGCCACTCCGGGGCCTTCCAGACCGCGTCCCCCGCCCCCGGCCTCTACCCCAAGTCTGCGTCCCCTTCCTCCGGCCTCCCCGCCGCCTTCAGCACGTTCGAGTGGATGAAAGTGAAGAGGAACGCCCCGAAGAAAAGCAAATTCGCCAAGTATGGAGCCGCCAACTCGTCCAGCGCGATCCGCACGAATTTCAGCACTAAGCAACTAACAGAACTAGAGAAGGAGTTTCATTTCAATAAGTACTTAACTCGGGCCCGACGAATCGAGATAGCCAACTCACTGCAGCTGAATGACACCCAAGTCAAAATCTGGTTCCAGAACCGCAGGATGAAACAGAAGAAAAGGGAACGAGAAGGGCTTCTGCCCTTGGCCACCACCCTGACTTCCCTCCAACTTCCCCTCTCAGGAACGAGCCCCACCAAGTCTGGCAAGAACCTGGGGAGCCCTTCTCAGGCCCAAGAACCTTCATGA

Related Sequences

bmy_07330T0 Protein

Length: 327 aa      View alignments
>bmy_07330T0
MSSYLDYVSCGSGRGGGDVLSFAPKFCRADARPVVLQPAFPIGRGDGAFVSCLPLAAARAAPSPPAAPEQPPAPPPAAPAYAPCPLEGTYEPGTAPAAAGGADYGLPGTGPPYDFPCALGRPADDGGAHVHYATSAVFSGGGSFLLSSQVDYAAFGEPAPFPACLKEPADGHSGAFQTASPAPGLYPKSASPSSGLPAAFSTFEWMKVKRNAPKKSKFAKYGAANSSSAIRTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQKKREREGLLPLATTLTSLQLPLSGTSPTKSGKNLGSPSQAQEPS*