Part of scaffold_338 (Scaffold)

For more information consult the page for scaffold_338 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LARP4 ENSTTRG00000003764 (Bottlenosed dolphin)

Gene Details

La ribonucleoprotein domain family, member 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003537, Bottlenosed dolphin)

Protein Percentage 95.22%
cDNA percentage 95.37%
Ka/Ks Ratio 0.23766 (Ka = 0.0054, Ks = 0.0226)

BT.19425 ENSBTAG00000017164 (Cow)

Gene Details

la-related protein 4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022821, Cow)

Protein Percentage 93.6%
cDNA percentage 94.51%
Ka/Ks Ratio 0.23054 (Ka = 0.0322, Ks = 0.1398)

LARP4  (Minke Whale)

Gene Details

La ribonucleoprotein domain family, member 4

External Links

Gene match (Identifier: BACU008021, Minke Whale)

Protein Percentage 99.32%
cDNA percentage 99.62%
Ka/Ks Ratio 0.59587 (Ka = 0.0032, Ks = 0.0054)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1323 bp    Location:1097000..1080146   Strand:-
>bmy_07774
ATGGATTCTAGTATGTATAGTCCTCCCATTCAAACTCAAGCACAGTATGCCTCACCGGTCTTTATGCAGCCTGTATATAATCCTCACCAGCAGTACTCTGTTTATAGTATTGTGCCTCAGTCTTGGTCTCCAAATCCCACACCTTACTTTGAAACACCACTGGCTCCTTTTCCCAATGGTAGTTTTGTGAATGGCTTTAATTCACCAGGATCTTATAAAACAAATGCTGCTGCTGCTGTGAATATGGGTCGACCATTCCAAAAAAATCGTGTGAAGCCTCATTTTAGGTCAAGTGGTTCAGAACACTCAACAGAGGGCTCTGTGTCATTGACGGATGGACCATTGAACAGACCTGGTTCAAGGAACTTTCCAACTGAACGACATAACCCTACAGTAACAGGGCACCAGGAGCAAAGCTACCTTCCAAAAGAGACTCCCACTTTGCAGATGGAACAGAATGGGGACTATGGTAGGGGCAGGAGAACTCTCTTCAGAGGTCGAAGACGTCGGGAAGATGAAAGGATCCCAAGACCCCATCCTTCAACAGCTGAAGCAAAGGCTCCAACACCAAAGTTTGACTTATTAGCCTCAAATTTTCCTCCTTTACCTGGAAGTTCATCAAGAACGCCAGGTGAACTTGTTTTGGAGAGTAGGATGTCTGATGTTGTTAAAGGTGTCTGCAAAGAAAAGGATAAGGAAGAGTTGAGAGTTAGTTGCCCAGTGACTGCAGAGGATGAACAGACAGACTGCACCTCTGCCCAGCAACTCAATATGAGCACCAGTCCTCCATGTACAGCTGAGCTTTCTGCATTAAGCACAACTCAGCAAGAAAAGGATCTAATAGAGGATTCCACTGTTCAGAAAGATGTTCCCAACCAGACAACTATACCAGTTTCTTCCCCGAGTACTGCAAAGCCATCGAGAACAAATACTGCTTCACCGTGTAATAGTAACATAAGTGCAGCTGTAGCTGTGGCCCTACAGGAACCTCGGAAGCTAAGTTATGCTGAAGTGTGCCAGAAGCCCCCTAAAGAGCCATCTCCAGTTCTTGTGCAGCCACTGCGAGAACTTCGCTCCAATGCAGTATCTCCCACCAAAAATGAAGAGAATGGAGCTCCTGAGAAGTCCTTCGAGAAACAACATGAGAAGCCAGAAGCAAGGGCTAGTAAGGATTACTCTGGCTTCCGAGGCAATGCCATTCCCAGGGGAGCAGCTGGAAAAATCAGGGAACAGAGACGCCAGTTTGGCCATAGGGCTATACCTCAGGGAGTGACTCGACGTAATGGCAAAGAGCAATACGTGCCACCCAGATCACCAAAGTAA

Related Sequences

bmy_07774T0 Protein

Length: 441 aa      View alignments
>bmy_07774T0
MDSSMYSPPIQTQAQYASPVFMQPVYNPHQQYSVYSIVPQSWSPNPTPYFETPLAPFPNGSFVNGFNSPGSYKTNAAAAVNMGRPFQKNRVKPHFRSSGSEHSTEGSVSLTDGPLNRPGSRNFPTERHNPTVTGHQEQSYLPKETPTLQMEQNGDYGRGRRTLFRGRRRREDERIPRPHPSTAEAKAPTPKFDLLASNFPPLPGSSSRTPGELVLESRMSDVVKGVCKEKDKEELRVSCPVTAEDEQTDCTSAQQLNMSTSPPCTAELSALSTTQQEKDLIEDSTVQKDVPNQTTIPVSSPSTAKPSRTNTASPCNSNISAAVAVALQEPRKLSYAEVCQKPPKEPSPVLVQPLRELRSNAVSPTKNEENGAPEKSFEKQHEKPEARASKDYSGFRGNAIPRGAAGKIREQRRQFGHRAIPQGVTRRNGKEQYVPPRSPK*