Part of scaffold_426 (Scaffold)

For more information consult the page for scaffold_426 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LCA5 ENSTTRG00000017305 (Bottlenosed dolphin)

Gene Details

Leber congenital amaurosis 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016402, Bottlenosed dolphin)

Protein Percentage 94.74%
cDNA percentage 96.75%
Ka/Ks Ratio 0.36596 (Ka = 0.0246, Ks = 0.0673)

LCA5 ENSBTAG00000043950 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053829, Cow)

Protein Percentage 74.66%
cDNA percentage 86.83%
Ka/Ks Ratio 0.943 (Ka = 0.151, Ks = 0.1602)

LCA5  (Minke Whale)

Gene Details

Leber congenital amaurosis 5

External Links

Gene match (Identifier: BACU002029, Minke Whale)

Protein Percentage 95.54%
cDNA percentage 97.2%
Ka/Ks Ratio 0.55303 (Ka = 0.0237, Ks = 0.0429)

Genome Location

Sequence Coding sequence

Length: 1146 bp    Location:41764..35113   Strand:-
>bmy_08992
ATGGTAGCTGCATGCCAGAGTGATTTTACAAACCAGTGTACAAAAGAAGTACAAACCAGTGAAGACTTCGAGCTGGAGGAATATCCTATAACACCACAAACAGTTATGTGTTATGAAAACAAATGGAAAGAACCTGAACGTCTTTCTTTGGATCTGGAACCTCAAGAGAGAGATGATCATGAAGAAGCAGGGATTCTAAACCCAATTGTGGAAAGAAAAGACAAATTTGTTAAAGATCAAGGACTCCATGCTGTGAAACAGGAGGCTGAGAAGCTGGAGGATGAGCGGGAAAGAGAAGAACTTGCTAAAAAGCAAAAGGAAAAGACATTTTTGTTGGAGAGAGAAGAAAAGCCAGTGTTGGAAACTGGAAGATACCAGATGGAAACGTACCAAATTCAAAATACTGATAAATTGGAAGAAGAGGAAGAAGAAAGGCTAAAGAGAGAAATGCTACTTGCTAAACTGAATGAAATCAGCAGAGAACTCCAAGGTTCTCGGAATCTAAAATATCCTTCTCTGCCATTGCTTCCTGATTTGGAATCAAAACTGCGCTCCCCAGAGAGAAACCCCAAAACACACACATTCTTTGAATCCTCAGGGAGATTATTTAATGGGCATCATTTGCAAGACATCAGTCTTTTCAATACAAAAGGAGATGGTCAGAATCCGGGCAATATTAGAAAACCAGCCTCTCCAGATGAGCTTGCATTTGGTAGCTATGTGCCTTCATTTGCGAAAACATTAGGGAAGTCAAATCCAGTTAGCCAAAAAAGTAGCCTTTTGGATTTCCAAAGAAACAATATAGAGAAATTTAGTAAAGACAGTGTAGATTTAATTACAAGAAAAGAGAAAAAAGCTAATCTGATGGAACAGCTATTTGGTGCCAGTGGCGGCAGCAGCATTTCCTCTAAAAGCAGTGACCCAAATTCTCTGGCTGCCACCAATGGAGACTTTGACCCTCTAAATTTTCTCCCTGGGGATAAAAGCAGCAGGGGTAGGGAATATGATGATGATGACGACTTTTTCTTCAGCGAAGGAAGAAGTTTTAATCCAAATAGACACCAATTAAAACATGCAAACAATAAACCAGCTGTAAAAGCAGTTGATTCTGTAGAAGATGAAATTGAAGAAGTAGCACTGAGATGA

Related Sequences

bmy_08992T0 Protein

Length: 382 aa      View alignments
>bmy_08992T0
MVAACQSDFTNQCTKEVQTSEDFELEEYPITPQTVMCYENKWKEPERLSLDLEPQERDDHEEAGILNPIVERKDKFVKDQGLHAVKQEAEKLEDEREREELAKKQKEKTFLLEREEKPVLETGRYQMETYQIQNTDKLEEEEEERLKREMLLAKLNEISRELQGSRNLKYPSLPLLPDLESKLRSPERNPKTHTFFESSGRLFNGHHLQDISLFNTKGDGQNPGNIRKPASPDELAFGSYVPSFAKTLGKSNPVSQKSSLLDFQRNNIEKFSKDSVDLITRKEKKANLMEQLFGASGGSSISSKSSDPNSLAATNGDFDPLNFLPGDKSSRGREYDDDDDFFFSEGRSFNPNRHQLKHANNKPAVKAVDSVEDEIEEVALR*