Sequence detailsbmy_09084 (Coding sequence)

Part of scaffold_437 (SequenceType object (1))

For more information consult the page for scaffold_437 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BRDTENSTTRG00000014360 (Bottlenosed dolphin)

Gene Details

bromodomain, testis-specific

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013635, Bottlenosed dolphin)

Protein Percentage 80.81%
cDNA percentage 85.49%
Ka/Ks Ratio 0.61014 (Ka = 0.0744, Ks = 0.1219)

BT.104862ENSBTAG00000047443 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000004850, Cow)

Protein Percentage 83.84%
cDNA percentage 88.27%
Ka/Ks Ratio 0.45844 (Ka = 0.1054, Ks = 0.2298)

BRDT (Minke Whale)

Gene Details

bromodomain, testis-specific

External Links

Gene match (Identifier: BACU020203, Minke Whale)

Protein Percentage 93.28%
cDNA percentage 95.1%
Ka/Ks Ratio 0.40572 (Ka = 0.0391, Ks = 0.0965)

Additional orthologs identified in other species via the OPTIC pipeline.

BRDT (Human)   Brdt (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1926 bp    Location:944330..958539   Strand:+
Raw sequence 
>bmy_09084
ATGTCTCTGCCAAGTCGACAAACAGCTATTGTTAACCCTCCACCACCAGCGTATATAAATACTAAGAAAAATGGGCGATGGACTAATCAACTGCAGTATCTACAAAAAGTTGTCCTGAAGGCTTTGAGGAAGCATAGTTTTTCCTGGCCTTTTCAGCAGCCTGTGGATGCTGTCAAACTAAAGTTGCCTGATTATTATACCATTATAAAAAACCCAATGGATTTAAATACAATCAAGAATCGCTTGGAACATAAATATTATGTGAAAGCTTCGGAATGTATAGAAGACTTCAATACAATGTTTTCAAATTGTTATTTATACAACAAGCCTGGAGATGACATTGTTCTTATGGCACAAGCTCTAGAAAAGCTGTTCAAGCAGAAATTATCTCAGATGCCACAAGAAGAGCAAGTTGTGGGTGGTAAGGAAAGAATAAAGAAAGATACTCAAGAGAATGTAGCAATTTCTGTTAAAGAAAARCAATCCCTCAAAGCACTGGAAAAAATACTTAAGCAGCAAGCAATTCCCTCCGTATTTCCCGAAACATTTATTTCTCCTTCAAACATGGCACAAGGTGCTCCACTGAACTCTGCCTCACAAACAGGGACCCAAGATGTGAAGAGGAAAGCAGATGCAACAACTCCTACAGCTTCAGTAGTTAAAGCAAGTGGTGAATCTTCCCCAACACTTACAGAAAAAAAATCAGGGAAGATGCCACCTATAAAAGAAAATGTGCTGACAAATGTTTTGACGGATTCTCAGCAACAATATAAAGTTGTAAAGAATGTTAAAGTAACCGAACAATTAAGGCACTGTAATGAGATTCTTAAAGAAATGCTTGCAAAGAAACACTTGTCATATGCATGGCCCTTTTATAATCCTGTTGACGTTAATGCTTTGGGACTCCATAACTACTATGATATTGCGAAAATGGATAACCAAGAATATAAAAATGCRTATGAATTTGCTGCAGATGTTAGATTAATGTTCATGAATTGCTACAAATACAATCCTCCAGATCATGAAGTAGTTACAATGGCAAGAATGCTTCAGGAGGTTTTCGAAATGCATTTTGCAAAGATCCCAGATGAACCTGTTGAGAGTATGCCTGTATGTTACATCAAAACAGATACCACAGAAACCCTTGGTAGAGAAAGGAGTAGTGAAGCTTCCTCTGCAGATAACTGTTCTGGTGATTCTGAAGATGAACAAGCTCAGAGTCTTGAAAAGCTTCAGGAGCAGCTTAAAGCTGTTCATCAACAGCTACAGGTTCTGTCCCAAGTACCTTTCAATAAGCTAAAGAGAAAGAATGAGAAGTCGAAAAGGGAAAAGAAAAAAGAAAAGATTGATAACAGAGATGAAAATCCAAGGAAAAAGTTTAAACAAATAAAGGAAAAGTCCAAGCGCAATCAGCCAAAGAAGGGGAAACAACAGGTCTTCGCTGCGAAATCTGAAGATAAAGATAATGCTAAACCTATGAACTATGATGAGAAAAGACAGTTAAGCTTGGATATAAACAAACTCCCTGGGGATAAACTTGGGCGAGTCCTTCATATAATACAGTCCAGAGAGGCTTCACTGAGAAATTCCAACCCTGACGAGATAGAGATAGACTTTGAAACACTGAAAGCATCAACACTGAGAGAACTGGAAAAATATGTTGCTGCATGTCTAAGAAAAAGACCACTAAAATTTCATGGTAAGAGAATAATGAAGTCCAAAGAAGAACTTCATTCACAGAAAAAACAAGAATTGGAAAAGCGGTTACAGGATGTCAATAATCAGTTAAATTCTAGAAAACATCAAACAAAACTGAAAGCAGCAGCAGTAGCAGCAGCAGTAGCTCATCAGAGTCTGAAAGTAGTAGCAGTGATTCAAGTTCTTCAGACAGCAGTGATTCCGAATCAGATTATCGTCCATTTATAG

Related Sequences

bmy_09084T0 SequenceType object (3)

Length: 642 aa      View alignments
>bmy_09084T0
MSLPSRQTAIVNPPPPAYINTKKNGRWTNQLQYLQKVVLKALRKHSFSWPFQQPVDAVKLKLPDYYTIIKNPMDLNTIKNRLEHKYYVKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFKQKLSQMPQEEQVVGGKERIKKDTQENVAISVKEKQSLKALEKILKQQAIPSVFPETFISPSNMAQGAPLNSASQTGTQDVKRKADATTPTASVVKASGESSPTLTEKKSGKMPPIKENVLTNVLTDSQQQYKVVKNVKVTEQLRHCNEILKEMLAKKHLSYAWPFYNPVDVNALGLHNYYDIAKMDNQEYKNAYEFAADVRLMFMNCYKYNPPDHEVVTMARMLQEVFEMHFAKIPDEPVESMPVCYIKTDTTETLGRERSSEASSADNCSGDSEDEQAQSLEKLQEQLKAVHQQLQVLSQVPFNKLKRKNEKSKREKKKEKIDNRDENPRKKFKQIKEKSKRNQPKKGKQQVFAAKSEDKDNAKPMNYDEKRQLSLDINKLPGDKLGRVLHIIQSREASLRNSNPDEIEIDFETLKASTLRELEKYVAACLRKRPLKFHGKRIMKSKEELHSQKKQELEKRLQDVNNQLNSRKHQTKLKAAAVAAAVAHQSLKVVAVIQVLQTAVIPNQIIVHL*