Part of scaffold_597 (Scaffold)

For more information consult the page for scaffold_597 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NEDD1 ENSTTRG00000009350 (Bottlenosed dolphin)

Gene Details

neural precursor cell expressed, developmentally down-regulated 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008879, Bottlenosed dolphin)

Protein Percentage 87.65%
cDNA percentage 90.49%
Ka/Ks Ratio 0.49617 (Ka = 0.0694, Ks = 0.1399)

NEDD1 ENSBTAG00000001894 (Cow)

Gene Details

Protein NEDD1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002464, Cow)

Protein Percentage 86.57%
cDNA percentage 89.44%
Ka/Ks Ratio 0.34342 (Ka = 0.0823, Ks = 0.2395)

NEDD1  (Minke Whale)

Gene Details

neural precursor cell expressed, developmentally down-regulated 1

External Links

Gene match (Identifier: BACU000949, Minke Whale)

Protein Percentage 85.62%
cDNA percentage 89.32%
Ka/Ks Ratio 0.67359 (Ka = 0.1065, Ks = 0.1581)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1965 bp    Location:699219..744061   Strand:+
>bmy_10955
ATGAATCTGGTTGATTTCCTTAAAGCCTTTTTGAACACTTTGCAAACTATTGAATCCATGGGACAGATAATGAGAGCAAAAGCAGACATGTGTCAGTTTAAATTCAACATCAATGTATTTGGGTGCCTGACCATTATTATGGATCATAAAGATGAAGTAACTTGTGTAACATATAATTGGAATGACTGCTACATTGCTTCTGGATCTCTCAGTGGTGAAATTATTTTGCACAGTGTAACCACTAATTTATCTAGTACTCCTTTTGGCCATGGTAGTAACCAGGTGACAGGTATAGCTTTTGTGAGTATTAATAAGCCTTATGAGTACGGAGATCTGTCTGTTCGGCACTTGAAGTATTCCTTGTTTAAGAAATCGCTACTGGGCAGTGTTTCGGATAATGGAATAGTAACTCTCTGGGACGTGAATAGTCAGAGCCCGTACCACAGCTTTGACGGTACACATAAAGCTCCAGGTTCAGGCATCTGTTTTTCTCCTGTCAATGAATTGCTATTTGTAACCATAGGCTTGGATAAAAGAATCATTCTCTATGACACTTCAAGTAAGAAGCTAGTGAAAACTTTAGTGGCTGACGCTCCTCTAACTGCAGTAGATTTCATGCCTGATGGAGCCACTTTAGCTATTGGATCTTCCCGTGGGAAAATATATCAATATGATTTAAGGATGTTGAAATCACCAGTTAAAACCATCAGTGCACATAAGACATCTGTGCAATGTGTAGCATTTCAGTACTCCACTGTCCTTTCTAAGTCAGGTTTAAATAAAGGCTGTTCAAATAAGCCCACAGCTGTGAACAAACGTACTGTTAATGTGAGCGCTGCTAGTGGAGGAGTCCAGAATTCTGGAGTTGTCAGAGAAGCAGCTACCACTTCCATTGCCACAGTTCTGCCACAGCCCACGACAGCAGTTGTGGGGAAAGGAACAGTTGCTGTTCAAGACAAAGCAGGTCTGCCTCGAAGCATAAACACAGATATTTTATCTAAGGAAACAGAGAGTGGGAAAACCCAGGATTTCTCCAGCTTTGATGATACTGGAAAAAGTAGTTTAGGTGACATGTTCTCACCTATCAGAGATGATGCTGTAGTTAACAAAGGAAGCCTTGACTATCTACCACAGTTGAACTCAGTGTTTCCTCCAAGAAAAAATCCAGTAGCTTCAGGCACTCCAGTGTTGCATTCTAGTCCTCTTAATGTCTTTACGGGGTCTCCAGGGAAAGAAGAAAATGAGAATCGTGATCTGACAGCTGAATCTAAGAAAATGTATCTGGGAAAACAGGAACCTAAAGACTCCTTCAAGCAGTTTGCAAAGTTGATCTCCGGTGCTGAAACTGGAAATCTAAATACCTCTCCATCATCCAACCAAACAAGAAGTCCTGAGAAATTTGAAAAGCCAGAAAAAGAAACTGAAGCCCAGTTTATATATGAACCTCCAGTCAATGGATCCTCAACTCCAAATCCAAAGATAGCATCTTCTGTCACTGCTGGAGTTGCCAGTTCACTATCAGAAAAAATAGCTGATACCATTGGGAATAATCGGCCAAATGCACCATTGACATCTGTTCAAATCCATTTTATTCAGAACATGATACAGGAAACATTGGATGACTTTAGAATGCGTCAGAATTTACTTAGTACTCTTGCTCAGATTTGGAATACCATGAGCAAGAATGTTGGAGAAGATGTGCAGTTTTTAGAAGCATGCCATAGGGATATTGTGAATTTGCAAGTGGAGATGATTAAACAGTTTCATATGCAATTGAATGAAATGCACTCTTTAGAAGCATGCCATAGGGATATTGTGAATTTGCAAGTGGAGATGATTAAACAGTTTCATATGCAATTGAATGAAATGCACTCTTTGTTGGAAAGATACTCAGTGAATGAAGGTTTAGTGGCAGAAATTGAAAGACTACGAGAAGAAAACAAAAGACTACGGGCACACTTTTGA

Related Sequences

bmy_10955T0 Protein

Length: 655 aa      View alignments
>bmy_10955T0
MNLVDFLKAFLNTLQTIESMGQIMRAKADMCQFKFNINVFGCLTIIMDHKDEVTCVTYNWNDCYIASGSLSGEIILHSVTTNLSSTPFGHGSNQVTGIAFVSINKPYEYGDLSVRHLKYSLFKKSLLGSVSDNGIVTLWDVNSQSPYHSFDGTHKAPGSGICFSPVNELLFVTIGLDKRIILYDTSSKKLVKTLVADAPLTAVDFMPDGATLAIGSSRGKIYQYDLRMLKSPVKTISAHKTSVQCVAFQYSTVLSKSGLNKGCSNKPTAVNKRTVNVSAASGGVQNSGVVREAATTSIATVLPQPTTAVVGKGTVAVQDKAGLPRSINTDILSKETESGKTQDFSSFDDTGKSSLGDMFSPIRDDAVVNKGSLDYLPQLNSVFPPRKNPVASGTPVLHSSPLNVFTGSPGKEENENRDLTAESKKMYLGKQEPKDSFKQFAKLISGAETGNLNTSPSSNQTRSPEKFEKPEKETEAQFIYEPPVNGSSTPNPKIASSVTAGVASSLSEKIADTIGNNRPNAPLTSVQIHFIQNMIQETLDDFRMRQNLLSTLAQIWNTMSKNVGEDVQFLEACHRDIVNLQVEMIKQFHMQLNEMHSLEACHRDIVNLQVEMIKQFHMQLNEMHSLLERYSVNEGLVAEIERLREENKRLRAHF*