Sequence details bmy_11291 (Coding sequence)

Part of scaffold_603 (Scaffold)

For more information consult the page for scaffold_603 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SHKBP1 ENSTTRG00000007161 (Bottlenosed dolphin)

Gene Details

SH3KBP1 binding protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006776, Bottlenosed dolphin)

Protein Percentage 81.55%
cDNA percentage 81.26%
Ka/Ks Ratio 0.2433 (Ka = 0.0254, Ks = 0.1043)

SHKBP1 ENSBTAG00000004755 (Cow)

Gene Details

SH3KBP1-binding protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000006241, Cow)

Protein Percentage 94.46%
cDNA percentage 91.76%
Ka/Ks Ratio 0.10498 (Ka = 0.0317, Ks = 0.3022)

Additional orthologs identified in other species via the OPTIC pipeline.

SHKBP1 (Human)   Shkbp1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2319 bp    Location:557755..568981   Strand:+
Raw sequence 
>bmy_11291
ATGGCAGCCGCGGCCCCTGCAGCAGACGGGGTCCCAGGTCGGGGACCTCCCGGGGAGGTGATTCATCTGAACGTGGGAGGCAAGAGATTCAGTACCTCTCGCCAGACTCTCACCTGGATCCCAGACTCCTTCTTCTCTAGTCTTCTGAGCGGACGCATCTCAACACTGAAAGATGAGACCGGAGCCATCTTCATCGACAGGGACCCCACCGTCTTCGCCCCTATCCTCAACTTCCTGCGCACCAAAGAGTTGGACCCCAGTCAATTCTACTACCCAGGGGTGTCCACGGTTCCAGCCTCCTCCACGAAGCCCAGTTCTATGGACTCACTCCTCTGGAAGCTTGGGTTAGAGCTGAGAGCACTGGGTTTGGTCCTGGGTCTCAGGAGGGTGGTGATATTCTGTGGAGAAAGAGATGGGGGAGGGGGAAAGGGATCTGCCTCAGTGTTCTCCAAGTCCCAGCCTTTGAGTCCTTCCGTCTTAGTTCGTCGTCTGCAGCTTCGGGAAGAGTTGGATCGATCTTCTTGCGGAAACGTCCTCTTCAATGGTTACCTGCCTCCACCAGTGTTCCCGGTGAAGCGGCGGAACAGGCACAGCCTGGTGGGGCCCCAGCAAGCAGGGGGACGCCCAGCCCCTGTTCGACGGAGCAACACGATGCCCCCCAACCTGGGCAATGCAGGGCTGCTGGGCCGAATGCTAGATGAGAAAGCCCCTCCCTCCCCATCAGGGCTACCAGAGGAGCCGGGAATGGTGCGCCTGGTGTGTGGACACCACAACTGGATCGCCGTGGCCTATACCCAGTTTCTTGTCTGCTATAGGCTGAAGGAAGCCTCTGGCTGGCAGCTGGTGTTCTCCAGTCCCCGCCTGGACTGGCCCATTGAGCGACTGGCACTCACAACCCGGGTGCTCAGTGGGGCCCTGGGTGAGCATGACAAGATGGTGGCAGCAGCCACGGGCAGCGAGATTCTGCTGTGGGCTCTGCAGGCAGAAGGCGGTGGCTCTGAGATAGGAGTCTTCCATCTGGGCGTGCCTGTGGAGGCCTTATTCTTCGTCGGGAACCAGCTCATTGCCACAAGCCACACAGGGCGCATTGGGGTGTGGAACGCCGTCACCAAGCACTGGCAGGTCCAGGAGGTGCAGCCCATCACCAGTTACGATGCTGCAGGCTCCTTCCTCCTCCTGGGCTGCAACAACGGCTCCATCTACTACGTGGATGTGCAGAAATTCCCCCTGCGCATGAAGGACAATGACCTCCTTGTCAGCGAGCTCTACCGGGACCCGGCGGAGGATGGAGTCACAGCCCTGAGCGTCTACCTCACCCCAAAGACCAGTGACAGTGGGAACTGGATCGAGATCGCCTACGGCACCAGCTCAGGGGGCGTGCGTGTCATCGTGCAGCATCCCGAGACCGTGGGCTCGGGGCCTCAGCTCTTTCAGACCTTCACCGTGCACCGCAGCCCCGTCACCAAGATCATGCTGTCAGAGAAGCACCTCATCTCAGTCTGTGCCGACAACAACCATGTACGGACGTGGTCTGTGACTCGCTTCCGTGGCATGATTTCCACCCAGCCTGGCTCCACCCCGCTCGCTTCATTCAAGATCCTGGCGCTGGAATCGGCCGATGGGCATGGCGGCTGCAGTGCTGGCAATGACATTGGGACCCCAGCTGGCCCTGACTGCCCCTCTCTACCTGGCCCAGGCCCCTACGGCGAGCGGGATGACCAGCAAGTGTTCATTCAGAAGGTGGTACCAAATGCCAGCCAGCTCTTCGTGCGTCTTTCCTCCACTGGTCAGAGGGTGTGCTCCGTGCGCTCCGTGGACGGCTCGCCCACCACCGCCTTCACGGTGCTCGAGTGTGAGGGCTCCCGGAGGCTGGGCTCCCGGCCCCGGCGCTACCTGCTCACTGGCCAGGCCAACGGCAGCTTGGCCCTGTGGGACCTGACCACCGCCATGGACGGCCTCGGCCAGGCGCCTGCAGGGGGCCTGACAGAGGAAGAGCTGCTGGAACAGCTGGAGCAGTGCGAACTAGCCCCACTGGCTTCCTTGAGGGGCGCTCCCCCCAGCCCCTCGCCCCGGACCTCTCTCACCAGTCTCCACTCAGCCTTCAGCAGCGCTTCCCTGTCCAGCCGCCGTGGGAGCCCGAGCCCCCCCCAGGCTGAGGCCCGGCGTCGCTGGGGAGGCAGCTTTGTGGAACGCTGCCAGGAACTGGTGCGGAGCGGGCCGGAGCCCCGGCGGCCACCGACACCAGCCCCCCGGCCCTCCGCGGGTCTCGGGGCTCCCCTTGCACCCCCCAAGATGAAGCTCACTGAAACTTCCTTCTGA

Related Sequences

bmy_11291T0 Protein

Length: 773 aa      View alignments
>bmy_11291T0
MAAAAPAADGVPGRGPPGEVIHLNVGGKRFSTSRQTLTWIPDSFFSSLLSGRISTLKDETGAIFIDRDPTVFAPILNFLRTKELDPSQFYYPGVSTVPASSTKPSSMDSLLWKLGLELRALGLVLGLRRVVIFCGERDGGGGKGSASVFSKSQPLSPSVLVRRLQLREELDRSSCGNVLFNGYLPPPVFPVKRRNRHSLVGPQQAGGRPAPVRRSNTMPPNLGNAGLLGRMLDEKAPPSPSGLPEEPGMVRLVCGHHNWIAVAYTQFLVCYRLKEASGWQLVFSSPRLDWPIERLALTTRVLSGALGEHDKMVAAATGSEILLWALQAEGGGSEIGVFHLGVPVEALFFVGNQLIATSHTGRIGVWNAVTKHWQVQEVQPITSYDAAGSFLLLGCNNGSIYYVDVQKFPLRMKDNDLLVSELYRDPAEDGVTALSVYLTPKTSDSGNWIEIAYGTSSGGVRVIVQHPETVGSGPQLFQTFTVHRSPVTKIMLSEKHLISVCADNNHVRTWSVTRFRGMISTQPGSTPLASFKILALESADGHGGCSAGNDIGTPAGPDCPSLPGPGPYGERDDQQVFIQKVVPNASQLFVRLSSTGQRVCSVRSVDGSPTTAFTVLECEGSRRLGSRPRRYLLTGQANGSLALWDLTTAMDGLGQAPAGGLTEEELLEQLEQCELAPLASLRGAPPSPSPRTSLTSLHSAFSSASLSSRRGSPSPPQAEARRRWGGSFVERCQELVRSGPEPRRPPTPAPRPSAGLGAPLAPPKMKLTETSF*