Sequence detailsbmy_11748 (Coding sequence)

Part of scaffold_650 (SequenceType object (1))

For more information consult the page for scaffold_650 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NR1I2ENSTTRG00000016650 (Bottlenosed dolphin)

Gene Details

nuclear receptor subfamily 1, group I, member 2

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000015785, Bottlenosed dolphin)

Protein Percentage 56.25%
cDNA percentage 67.71%
Ka/Ks Ratio 0.50605 (Ka = 0.3864, Ks = 0.7636)

NR1I2ENSBTAG00000019557 (Cow)

Gene Details

nuclear receptor subfamily 1 group I member 2

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000026059, Cow)

Protein Percentage 52.63%
cDNA percentage 64.08%
Ka/Ks Ratio 0.32837 (Ka = 0.4109, Ks = 1.2514)

Additional orthologs identified in other species via the OPTIC pipeline.

NR1I2 (Human)   Nr1i2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1461 bp    Location:615738..622967   Strand:+
Raw sequence 
>bmy_11748
ATGAATGTTGCAGGACAAGTCTCCTCCCCCGCTCCCCTCCTCCAGCCGGCTCCGGGGCCCCTGGGGAAGCCCAGCACCCACCGACAGAAGCCTGAAGAGCCTCCGCCTGTACCCCTCCTGTGGCCCCGACCCAACTCAGAGGCAAAGGCAGGACCCACAGAGGGTGTGACTAGTGTCCGTGTCGGGAGGGGACAGGGAGCCAGGGTGCCCCACGCGGCCTACCTCGTGCTCTTTGTCCTCTCGCAGCACAGCCATGAAACGCAACGCCCGGCTCTGGTGCCCTTTCCAGAAGGGCACCTACGAGATCACCCGGAAGGCCCGGCGGCAGTGCCAGGCCTGCCGCCTGCGCACGCTCCTGGAGAGCGGCTGGAGGAAAGACAGCACAGGCGGCGCAGGCGGGCGTGGGCACGTGAGCCCGAGCAGGCTCGGGCCGCGGGATGTGTGCGAGCGCATGCGCAGACGGGCGGGCGTCGGCCTGAGGCCAGGTACCTGAGGCTGCTCCTGGCTATCCCTGCAGTGATCATGTCCGACACGGCCGTGGAGCAGAAGCGGGCCTTGATCAGGAGGAAGAAGAGAGAACAGATTGGGACTCAGCCCCCTGGAGCCCAGGGTCTGACTGAAGAGCAGCAGATGATGATCAGGGAGTTGATAACCGCTCAGATGAAAACCTCTGATAGCACCTTCACGCATTTCAAGAATTTCCGGCTCATGTCCCAGCTGCCAGAGGTGCTTAGCAGTGCCCACAAGATTCGGAGTCTCTGCAGACTCAGTCAAGTGAAGAAGCTGCCAAGTGGAGCAAGATCAGGGAAGATCTATGTTCACTGCGGGGGGAAGACGGCAGCATCTGGAACTACAAGCCCCCAGCCGACAATAGTGGGAAAGAGATCTCTTCCCTGTTGCCCCACATGGCTGACACGTCAACCTACATGTTCAAAGGCATCATCAACTTTGCCAAAGTCATTCTCCTATTTCAGGGACCTGCTCATCGAGGACCAGATCTCCCTGCTGAAGGGGGCCACCTTTGAGCTGTGCCAGCTGAGATTCAACACGGTGTTCAACGCAGAGACCAGGACCTGGGAGTGTGGTCAGCTGTCCTACTGCTTGGAAACCCTGCCGGTGCCCGAGAGATGCCTGTCTGCCCTGGCAGAGGGTGGCTTCCAGCAGCTTCTACTGGAGCCCGTATTGAAATTCCACTACCTGCTGAAGAAGCTGCAGCGGCATAAGGAGGAGTGCCGCTTGCTGGACCAGCTGCAGAAGCGGTTCGTCATTACCCTGAAGGCCTACATCGAGTGCAACCGGCCCCGGCCCGCCCACTGGTTCCTGTTCCTGAAGATCTTGGCTATGCTTGCTGAGCTCCGCAGCATCAACGTCCAGCACACCCAGCGGCTGCTGCGCATCCAGGACATTCACCCCTTTGCCACCCCACTCACGCAGAAGTTGTTCAGCATCACAAATGGCTGA

Related Sequences

bmy_11748T0 SequenceType object (3)

Length: 487 aa      View alignments
>bmy_11748T0
MNVAGQVSSPAPLLQPAPGPLGKPSTHRQKPEEPPPVPLLWPRPNSEAKAGPTEGVTSVRVGRGQGARVPHAAYLVLFVLSQHSHETQRPALVPFPEGHLRDHPEGPAAVPGLPPAHAPGERLEERQHRRRRRAWAREPEQARAAGCVRAHAQTGGRRPEARYLRLLLAIPAVIMSDTAVEQKRALIRRKKREQIGTQPPGAQGLTEEQQMMIRELITAQMKTSDSTFTHFKNFRLMSQLPEVLSSAHKIRSLCRLSQVKKLPSGARSGKIYVHCGGKTAASGTTSPQPTIVGKRSLPCCPTWLTRQPTCSKASSTLPKSFSYFRDLLIEDQISLLKGATFELCQLRFNTVFNAETRTWECGQLSYCLETLPVPERCLSALAEGGFQQLLLEPVLKFHYLLKKLQRHKEECRLLDQLQKRFVITLKAYIECNRPRPAHWFLFLKILAMLAELRSINVQHTQRLLRIQDIHPFATPLTQKLFSITNG*