Sequence detailsbmy_13120 (Coding sequence)

Part of scaffold_850 (SequenceType object (1))

For more information consult the page for scaffold_850 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PAPOLAENSTTRG00000005717 (Bottlenosed dolphin)

Gene Details

poly(A) polymerase alpha

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005400, Bottlenosed dolphin)

Protein Percentage 74.46%
cDNA percentage 74.23%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0268)

PAPOLAENSBTAG00000004054 (Cow)

Gene Details

Poly(A) polymerase alpha

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000005300, Cow)

Protein Percentage 98.1%
cDNA percentage 97.37%
Ka/Ks Ratio 0.13266 (Ka = 0.0098, Ks = 0.074)

Additional orthologs identified in other species via the OPTIC pipeline.

PAPOLA (Human)   Papola (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2211 bp    Location:91682..49588   Strand:-
Raw sequence 
>bmy_13120
CCAGTTACAACGCAGGGGTCACAGCAAACACAGCCGCCACAGAAGCACTATGGCATTACCTCTCCCATCAGCTTAGCAGCCCCCAAGGAGACTGACTGCCTGCTTACCCAGAAACTAATTGAGACTCTGAAGCCTTTTGGCGTTTTTGAAGAGGAAGAGGAACTGCAGCGCAGGATTTTAATTTTGGGAAAATTAAATAACCTGGTAAAAGAGTGGATACGAGAAATCAGTGAAATCAAGAATCTTCCACAATCTGTAATTGAAAATGTTGGTGGAAAAATATTTACATTTGGATCTTATAGATTAGGAGTACATACAAAAGGTGCCGATATTGATGCGTTGTGTGTTGCACCAAGACATGTTGATCGAAGTGACTTTTTCACCTCGTTCTATGATAAGTTGAAATTACAGGAAGAAGTAAAAGATTTAAGAGCTGTTGAAGAGGCATTTGTACCAGTTATCAAACTGTGTTTTGATGGGATAGAGATTGATATTTTGTTTGCAAGATTAGCACTGCAGACTATTCCAGAAGACTTGGACTTAAGAGATGACAGTCTGCTTAAAAATTTAGATATAAGATGCATAAGAAGTCTTAACGGTTGCAGGGTGACCGATGAAATTTTACATCTAGTACCAAACATTGACAACTTCAGGTTAACCCTGAGAGCTATCAAACTGTGGGCCAAACGCCACAACATCTATTCCAATATATTAGGTTTCCTCGGTGGTGTTTCCTGGGCTATGCTAGTAGCAAGAACTTGCCAGCTTTATCCAAATGCAATAGCATCAACTCTTGTACATAAATTTTTCTTGGTATTTTCTAAATGGGAATGGCCAAATCCAGTCCTATTGAAACAGCCTGAAGAATGCAATCTTAATTTGCCTGTATGGGACCCAAGGGTAAACCCCAGTGATAGGTACCATCTTATGCCTATAATTACACCAGCATACCCACAACAGAACTCCACGTACAATGTGTCCGTTTCAACACGGATGGTCATGGTTGAGGAGTTTAAACAAGGTCTTGCTATCACAGATGAAATTTTGCTGAGTAAGGCAGAGTGGTCCAAACTTTTTGAAGCTCCAAACTTCTTTCAAAAGTACAAGCATTATATTGTACTTCTAGCAAGTGCACCAACTGAAAAACAACGCCTAGAATGGGTGGGCTTGGTGGAATCAAAAATCCGAATCCTGGTTGGAAGTTTGGAGAAGAATGAATTTATTACTCTGGCTCATGTGAATCCCCAGTCATTTCCAGCACCCAAAGAAAATCCTGACAAGGAAGAATTTCGCACGATGTGGGTGATTGGGTTAGTGTTTAAAAAAACAGAAAACTCTGAAAATCTCAGTGTTGATCTCACCTACGATATTCAGTCTTTCACAGATACAGTTTATAGGCAAGCAATAAACAGCAAGATGTTTGAGGTGGACATGAAAATTGCTGCAATGCATGTAAGAAGAAAGCAACTCCATCAACTACTGCCTAATCATGTGCTTCAGAAAAAGAAAAAGCATTCAACAGAAGGTGTCCGGTTGACCCCTCTGAATGACAGCAGCCTTGACCTGTCTATGGACAGTGATAACAGCATGTCTGTGCCTTCGCCGACCGGTGCTGCGAAGACCAGCCCGCTGCACAGTTCCGGCGGCTCTCAGGGCAGAAACAGTCCTGCTCCAGCTGTAACAGCAGCATCTGTGACCAACATACAGGCTACTGAAGTTTCTGTGCCACAAGTAAATTCCAGTGAAAGCTCAGGGGGTACATCGAGTGAAAGCATTCCTCAAACTGCCACACAACCAGCCATTTCATCACCACCAAAGCCTACGGTCTCCAGAGTTGTTTCTTCAACACGTCTGGTAAACCCACCACCAAGACCTTCAGGAAATGCAGCAACAAAGACACCTAATCCTATAGTAGGAGTCAAGAGGACATCCTCACCTCATAAAGAGGAGAGTCCCAAGAAAACCAAAACAGAAGAGGATGAAACAAGTGAAGATGCTAACTGTCTTGCTTTGAGTGGACATGATAAAACAGAAACGAAGGAACAACTTGATACAGAGACAAGTACAACTCAATCAGAAACCATTCAGACAGCGGCTTCTCTGTTGGCCTCTCAGAAAACATCCAGTACAGACCTTTCTGATATCCCTGCTCTCCCTGCAAATCCTATTCCTGTTATCAAGAATTCAATAAAACTGAGATTGAATCGGTAA

Related Sequences

bmy_13120T0 SequenceType object (3)

Length: 737 aa      View alignments
>bmy_13120T0
PVTTQGSQQTQPPQKHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISEIKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVRRKQLHQLLPNHVLQKKKKHSTEGVRLTPLNDSSLDLSMDSDNSMSVPSPTGAAKTSPLHSSGGSQGRNSPAPAVTAASVTNIQATEVSVPQVNSSESSGGTSSESIPQTATQPAISSPPKPTVSRVVSSTRLVNPPPRPSGNAATKTPNPIVGVKRTSSPHKEESPKKTKTEEDETSEDANCLALSGHDKTETKEQLDTETSTTQSETIQTAASLLASQKTSSTDLSDIPALPANPIPVIKNSIKLRLNR*