Sequence details bmy_14008 (Coding sequence)

Part of scaffold_947 (Scaffold)

For more information consult the page for scaffold_947 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SPIB ENSTTRG00000002421 (Bottlenosed dolphin)

Gene Details

Spi-B transcription factor (Spi-1/PU.1 related)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002268, Bottlenosed dolphin)

Protein Percentage 78.46%
cDNA percentage 82.56%
Ka/Ks Ratio 0.31559 (Ka = 0.1528, Ks = 0.4843)

SPIB ENSBTAG00000043953 (Cow)

Gene Details

transcription factor Spi-B

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053467, Cow)

Protein Percentage 77.78%
cDNA percentage 80.2%
Ka/Ks Ratio 0.21943 (Ka = 0.158, Ks = 0.7202)

SPIB  (Minke Whale)

Gene Details

Spi-B transcription factor (Spi-1/PU.1 related)

External Links

Gene match (Identifier: BACU008287, Minke Whale)

Protein Percentage 73.14%
cDNA percentage 76.91%
Ka/Ks Ratio 0.43711 (Ka = 0.2346, Ks = 0.5366)

Additional orthologs identified in other species via the OPTIC pipeline.

CTD-2545M3.6 (Human)   Spib (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1194 bp    Location:202645..211375   Strand:+
Raw sequence 
>bmy_14008
ATGAGGAAGCGGGACCCCGGGAGCGCGCCCAGCCTGGGCGACCGTGTCCCCTACGTGATCATCAGTGCCGCCAAGGGCGTGGCCGCCTACATGAAGTCCGAGGGACCGCAGCCCCTCATCCCTTCCCGGGCCCCTGTGTGTGTGGTGAGGCCACCCCGGCCGCTCTGCCCGCAGGACCCCCTCTTCGTGCTGGAGCACAGCCTGCCCATCGACACGCAGTACTACCTGGAGCAGCAGCTCGCCAAGCCTCTCCTGCGCATCTTCGAGCCCATCCTGGGCGAGGGCCGAGCCGAGGCCGTGCTGCTGCGTACGGCCGGCGGGCAGCCGGGGCAGGCGGGGGTACCGGGGTGGGGGTCGGGTGAGGGCGCCGAAACTGCTGCATTGGCTGCCGCACTGTCCTCAGCCACCAGGACTCTGGTCCACTTCCTCGAATGGGGAGGGCCCCCTCCCCCTCCCCCAGGCAGGCAAGACTGGGGGAATTCATCTACACCTTCCCCAGCTGCTACAATGTCACAACCGTGTATCGATCTATGGAGCTACGGCCTCAGTCCAGCTGTCCCAGCCGCCTCCTATGAAACCTTTGACCCGGCTGTAGCCACCTTCGGCCACACCCAGGGTGTCCAGCTCTGTTACGGACCCTCAACCTACAGCCCTGGGCCAGGAAGAAGCCAAGGGACGAAAGCAGAGGGAGTGAGAGAAGGGGGGCCTCCCCCTGGGACTACAGGTAACCCTGACCTTCCACAGACCCTGGGCCCCCTGGCGTACGCCCCATACCCCAGCCCCGTGCTGTCAGAGGAAGAGGACCTCCTGCTGGACAGTCCCGCCCTGGAGGTCTCGGACAGCGAGTCGGATGAGGCCCTCATGGCTGGCCCCGAGGGGAGGGGATCTGAGGCAGGGGCCCGCAAGAAGCTGCGCCTGTACCAGTTCCTGCTGGGGCTGCTGACGCGCGGAGACATGCGCGAGTGCGTGTGGTGGGTGGAGCCGGGCGCCGGGGTCTTCCAGTTCTCCTCGAAGCATAAGGAGCTCCTGGCGCGCCGCTGGGGCCAGCAGAAGGGCAACCGCAAACGCATGACCTACCAGAAGCTGGCGCGCGCCCTTCGCAACTACGCCAAGACCGGCGAGATCCGCAAGGTCAAGCGCAAGCTCACCTACCAGTTTGATAGTGCGCTGCTGCCCGCCGCCCGCCGGGCCTGA

Related Sequences

bmy_14008T0 Protein

Length: 398 aa      View alignments
>bmy_14008T0
MRKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEGPQPLIPSRAPVCVVRPPRPLCPQDPLFVLEHSLPIDTQYYLEQQLAKPLLRIFEPILGEGRAEAVLLRTAGGQPGQAGVPGWGSGEGAETAALAAALSSATRTLVHFLEWGGPPPPPPGRQDWGNSSTPSPAATMSQPCIDLWSYGLSPAVPAASYETFDPAVATFGHTQGVQLCYGPSTYSPGPGRSQGTKAEGVREGGPPPGTTGNPDLPQTLGPLAYAPYPSPVLSEEEDLLLDSPALEVSDSESDEALMAGPEGRGSEAGARKKLRLYQFLLGLLTRGDMRECVWWVEPGAGVFQFSSKHKELLARRWGQQKGNRKRMTYQKLARALRNYAKTGEIRKVKRKLTYQFDSALLPAARRA*