Part of scaffold_1001 (Scaffold)

For more information consult the page for scaffold_1001 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCDC88C ENSTTRG00000013596 (Bottlenosed dolphin)

Gene Details

coiled-coil domain containing 88C

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012902, Bottlenosed dolphin)

Protein Percentage 86.57%
cDNA percentage 88.19%
Ka/Ks Ratio 0.2818 (Ka = 0.0328, Ks = 0.1163)

BT.49778 ENSBTAG00000000838 (Cow)

Gene Details

protein Daple

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053705, Cow)

Protein Percentage 91.11%
cDNA percentage 91.57%
Ka/Ks Ratio 0.11874 (Ka = 0.0431, Ks = 0.3631)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 5673 bp    Location:425530..549205   Strand:+
>bmy_14443
ATGGACGTGACCGTCTCGGAGCTCATGGAGCTCTTCCTGCAGAGCCCGCTGGTGACCTGGGTGAAAACTTTTGGCCCCTTCGGAAGCGGCAACCAGGACAACCTGACAATGTACATGGATTTAGCGGACGGCATCTTTTTGAACCAAATCATGTTGCAAATAGATCCCAGGCCAACAAATCAACGCATCAACAAACACGTCAACAATGATGTGAACCTTCGCATTCAGAACTTGACCATCTTGGTGAGAAACATTAAGACCTACTACCAGGAAGTTCTCCAGCAGCTGATCGTAATGAATTTGCCCAATGTCTTGATGATTGGCAAAGACCCGCTGTCTGCCCCAGGTTGCCCTTGTAAAACTTTCATTAACACTTGTAACCCTCCACAGTGTGAGAGGAAAGAGGAATTTATCGAAAGAATCAAACAGCTGGACATTGAGACACAGGCCGGGATCGTGGCCCATATACAGGAGGTGACCCACAACCAGGAGAATGTGTTCGACCTGCAGTGGTTGGAGCTCCCGGACGTGGCCCCGGAGGAGCTGGAGGCCCTGTCGAGGAACATGGTCTTTCACCTCAGGCGGCTCATCGACGAGAGGGACGAGTGCACGGAGCTGATCGTGGACCTCACCCAGGAGCGGGACTACCTGCAGGCCCAGCACCCGCCCAGCCCCCTCAAGTCCTCCAGCGCCGAGTCCACCCCGAGCCCCACCAGCAGCCTCTCCAGCGAGGACAAGCAGCACCTGGCCGTGGAGCTGGCGGACACCAAGGCCAGGCTGCGCCGCGTCAGGCAGGAGCTGGAGGAGAAGACAGAGCAGCTTGTGGACGCCAGGCATGAGGTAGATCAGCTGGTGCTGGAGCTGCAGAAAGTCAAGCAGGAGAATATCCAGCTGGCGGCTGACGCCCGGTCTGCCCGTGCCTATCGCGATGAGCTCGATTCCCTGAGGGAGAAGGCGAACCGTGTGGAGAGGCTGGAGATGGAGCTGGTGCGCTGCCGGGAGAAGCTGCACGACGTGGACTTCTACAAGGCCCGCATGGAGGAGCTGAGAGAAGATAATATCATTTTAATTGAAACCAAGGCCATGCTGGAGGAACAGCTGACTGCCGCTCGAGCCCGGGGCGATAAAGTGCACGAGCTGGAGAAAGAGAACCTGCAGCTGAAATCAAAGCTTCACGACCTGGAATTGGACCGGGACACGGATAAGAAGCGAATAGAGGAGCTGCTGGAAGAAAACATGGTCCTCGAGATTGCCCAGAAGCAGAGCATGAATGAATCCGCCCACCTCGGCTGGGAGCTGGAGCAGCTGTCCAAGAATGCAGACCTGTCCGACGCCTCCAGGAAGTCGTTTGTGTTTGAGCTGAACGAGTGCGCCTCTAGCCGCATCCTGAAGCTGGAGAAGGAGAACCAGAGCCTCCAGAGCACCATCCAGGGGCTGCGGGATGCGTCCCTGGCGCTGGAGGAGAGCAGCCTCAAGTGCGGGGAGCTGGAGAAGGAGAATCACCAGCTCAACAAGAAGATTGAGAAGTTACAGACCCAGCTGGAGAGGGAGAAGCAGAGTAACCAGGATTTGGAGACCCTGAGTGAGGAGCTGATCAAAGAGAAGGAGCAGCTGCAGAGCGACATGGAGACCTTGAAGGCTGACAGAGCCCGGCAGATCAGGGACCTCGAACAAGAAAAGGACCATCTCAACCAGACGGTGTGGACGCTGCGGGAGAGGTCGCAGGTCAGCAGCGAGGCCCGCGCGAAGGACGCCGAGCAGGAGAGCAAAGCCCTGCACGGGACGGTGGCAGAGGCCAGCGGCCGGCTGAGCAGGCCGGAGCTGGAGCAGGCTCAGGAGAAGGCGGGGCGGGCGGAGGAGCTGGAGCGGGAGCTGCGGCGGCTGGAGGAGGAGAAGGGGAGGCTGGCGCAGAGGGTGAGCTCCCTGCAGGCGGCGGGCGAGCGGGCGGACGCCGCGGAGCGCGAGAGCCGCGGGCTGGCGCTGGAGAACCGGCGGCTGCGCAAGTCCCTGGACGCCCTGCAGAACGTGCAGGTGCGGCTGGCCGGCCTGGAGCTGGACAACAGGCAGCTGGACGAGGAGAACCTGGAGCTGCGCAGGGTGGCGGAGGCCACGCGCTTCACGGGCGCCAAGGTGGCCCAGCTGGAGCGCGAGAACCAGGAGCTCAGGAGGAGCGTGGAGCTGCTCAAGGCGCTGGGCAAGAAGTCAGAGCGCCTGGAGCTCGGCTACCAGAGCCTGAGCGCCGAGAACCTGCGGCTGCAGCAGAGCCTGGACAGCGGCGGCCAGAAGGCGCAGGCCCTAGAGCGGGAGCTGGGGCAGCTGGAGGCCGAGAACCAGGCCCTGCAGCGCGACCTGGAGGCCCTCCGGCTCGCCAACCGGCAGCTCGAGCGGGCCGGCCAGGACCGGCAGGCGCTGGAGCAGGAGGTGGCCCAGCTGGAGAAAGACAAGAAGCTGCTGGAGAAGGAGGCCCGGCGTCTGTGGCAGCAGGTGGAACTCAAGGACGCCGTCCTGGACGACAGCTCCGCCAAGCTGTCCGCCGCCGAGAGGGAGAGCCGCGCGCTGGACAGGGAGCTGGCCCGCTGCCGGGACGCGGCCGGCAAGCTGAAGGAGCTGGAGAAGGACAACAGGGACCTCACCAAGCAGGTCACCATGCACACGAGGACGCTGACCACCCTGAGGGAGGACCTGGTGCAGGAGAAGCTGAAGAGCCAGCAACTGAGCAGTGAGCTGGACAAACTGAGCCAGGAGCTGGAGAAGCTCGGCCTCCACAAGGAGCTGCTGCTGCGGGATGACAGCAGCAACGGTGACACGAAATACAAGATTTTGGAGAGCATAAATGAATCAGCATTCAAAACAACACTAGCCAGGAAAGAAGAAAAGATTGTATTCTTAGAAGCACAGATGGAAGAGAAAGCCAGCCTGAATCACCACCTACAGAACGAGCTCCAGGTGTTGAAGAAGGAGTGTGAGATCCTCAGGAAGAACCAGGAAGAGGGGAAGCAGGTGCAGAACTCTTTCAAACACCCTGTGGGGCCGTTGGTCGAGGGTCACCCGGGGAAGGAGCGCTGGGGGCCCAGCCCCAAGGAGGCCACGATGGAGCTGCTCCGCGTGAAGGACCGGGCCATCGAGCTGGAGCGCAACAACGCGGCTCTGCAGGCTGAGAAGCAGCTGCTGAAGGAACAGCTGCAGCACTTGGAGACCCAGAACACGGCCTTCAGCAGTCAGATCCTGGCGCTGCAGAAGCAGAGTGCCTTCCTGCAGGAGCACAACACCACGCTACAGACGCAGACGGCGAAGCTGCAGGTGGAGAATTCCACTCTGAGCTCCCAGAGCGCCTCACTCACCGCACAGTACGCGCTGCTCCAGAACCAGCAGACGGCCAAGGAGAGCGAGATCGAAAACCTGCAGAAGCAGCAGGAACAGCTGACGGCCGCCTACCAGGCCCTGCTGCAGGACCACGAGCACCTGGGCGCACTCCACGAGCGGCAGTCCGCGGAGTACGAGGCCCTCATCCGCCAGCACAGCTGCCTGAAAACACTGCATCGCAACCTGGAGCTGGGGCACAAGGAGCTCGGGGAGAGGCACAGCGACATGCTGAAGCACAAGGCAGAGCTGGATGAGCTGGAGAAGGTTCTGAATGCCGAGAGGGAGGCTTTGCAGCAGGAGCAGAGGACGAGCGCCGCGGCCGCGAGCGAGAACCGGAGGCTGCAAGAGGAGCTAGACAGAGACAAGTTAAATGCCTTACGAAGACATAAGGAAAAACTGGAAGAAAAAATCATGGATCAGTACAAGTTCTATGATCCTGCTCCAAAGAAGAAAAACCACTGGATTGGAGCCAAAGCTTTAGTCAAACTCATCAAACCAAAGAAAGAGGGTTCCAGAGAACGATTGAAGTCAACTACAGACAGTCCTCCCCGGCAGCTGGAGTCCCCGGACCCAACCTCGCCATCCGCTTCTCAGCCGCTCAGATCCCAGCCAGAGAACCCCGAGGCCACCCCGTTGGGCTCAAGCTGTGCAGAAGAGCGTGACATCCACAACGGGACCCTGGGAAAAGGTCCTGGGGACCTAAAGCCAAAGCAAGGGTCCCCGCACAGAGACAGCCTTGACCGCAAGGATGCCTCTGCTGACCCAGCCATGAAGACCTGGCCCGTGGAGCTGGGYCCCCGGCCCTGTTCGTCCTCAGCCATCACTACAACCCCTTCCAGCTCTACCCCCATCTCGCGGCACCCAGGCCGCACCAAAGGCTATAATTCTGATGACAGCCTCTGCGAACCATCCCTGGAGCTCGAGTTCGCTCCCCACAGGCAGTACGCATCCCGGCCGGGGAGCTTGGAGAGCAGTAGAAATGCGTCCAGCGACAGCTCACCTCTTAACCTGAAAGGTTCCTCCGACCAGCTCCACGGCAGGTCCGAGAGCTTCAGCAGCGAAGACCTGATCCCCAGTAGGGACACAGCCACTCTGCCGCGGGATGCCAGCACCCCGGGGCGCACTGCCCTCAGCCGCCATGAGTACCCCCCACCCCGGAACGGGCCTCTCCCCCAAGAGGGCGCCCGGAAGAGGGGCGCAGCCCAGCCCCATGGCGGGGTGCGGCCCTGCTCAGCCTCCCCGAGCAGTGAGATGGTCACCCTGGAGGAGTTCCTGGAGGAGAGCAACCGGGGCTCCCCTTCCTCCGACGCTCCCAGTTGCCGGGATGACCTGCTAAGTGACTATTTCAGAAAGGCCAGCGATCTCCCGGCCATCGTAGGCCAGCCAGGCCCACCTACCAGGAAAGAAGGGGCCAAGATGCCCACCAGCTTCGTGGCCCCCACCATCAAGATGCCCGTCACCACCTCCGAGGGGAAGCCGCTGAAGCCCGGGCAGTACGTGAAGCCGAACTTCAGACCCACTGAGGCCGAGGCCCTGCCCAGTGCCCCCCAGAGGCAGGCCCAGCCGCCCCAGAGCCTGTCCCTGGGCAGACTCCGGCAGGCCGCGATGCCCCCTGCTTCCCACACGCCCACTGGCCGGAGTGCATCCCTGAGCCGGGCCTTCAGCCTGGCCTCCGCCGACCTCCTCCGGGCCAGCGGGCCAGAGGCCTGCAAACAGGAGCCAGGGGGTCCCGAGGCCTCGGGGGGCAGAGACACAGGCAGCCACAGCCTGCAGAGCTCCACACCTCCCAGCTCCCACAGCCTGGCCCGGGAGCGGACCCCACTTGTGGGAAAGGCTGGCGGCTCCTGTCAGGGCCCTGGCCCCAGAAGCCGGCCACTGGACACGAGGCGCTTCTCTCTGGCTCCCCCGAAGGAGGAGAGGCCAGCTCCCCTGCAGCAGTCTGCCACGTCCCCAGCCATCGCCGCTGGAGGTGGCAGTGGCAGTGGCAGCAACTCCCAGTTCCAGCACTGCTCACCTGCTGCAGCCCCGGCTGCCAGGACTAAGCCCCAAGCCTCCCTGCACTCGGGAGAGGCGGCCACCATCGCCCCCGTCCGGGCGGGGTTCAGCCCCTCCGAGGGGGACGGGGTCCTGGGGCAGGGCCACAGCGAGGGCCTCCCTGCCAAGGGCCCGGGCAGGTCTCCCGACCTGGCTCCCCATGGCAGCCGGGCCTCCGAGGACTTCAGTCGTGGGAGCAGCTCGAAGAGCACGCCGGCATCCCCCGAGCCGGCTGGGGACCAGCAGACCGTGTGGTACGAGTACGGCTGTGTGTGA

Related Sequences

bmy_14443T0 Protein

Length: 1891 aa      View alignments
>bmy_14443T0
MDVTVSELMELFLQSPLVTWVKTFGPFGSGNQDNLTMYMDLADGIFLNQIMLQIDPRPTNQRINKHVNNDVNLRIQNLTILVRNIKTYYQEVLQQLIVMNLPNVLMIGKDPLSAPGCPCKTFINTCNPPQCERKEEFIERIKQLDIETQAGIVAHIQEVTHNQENVFDLQWLELPDVAPEELEALSRNMVFHLRRLIDERDECTELIVDLTQERDYLQAQHPPSPLKSSSAESTPSPTSSLSSEDKQHLAVELADTKARLRRVRQELEEKTEQLVDARHEVDQLVLELQKVKQENIQLAADARSARAYRDELDSLREKANRVERLEMELVRCREKLHDVDFYKARMEELREDNIILIETKAMLEEQLTAARARGDKVHELEKENLQLKSKLHDLELDRDTDKKRIEELLEENMVLEIAQKQSMNESAHLGWELEQLSKNADLSDASRKSFVFELNECASSRILKLEKENQSLQSTIQGLRDASLALEESSLKCGELEKENHQLNKKIEKLQTQLEREKQSNQDLETLSEELIKEKEQLQSDMETLKADRARQIRDLEQEKDHLNQTVWTLRERSQVSSEARAKDAEQESKALHGTVAEASGRLSRPELEQAQEKAGRAEELERELRRLEEEKGRLAQRVSSLQAAGERADAAERESRGLALENRRLRKSLDALQNVQVRLAGLELDNRQLDEENLELRRVAEATRFTGAKVAQLERENQELRRSVELLKALGKKSERLELGYQSLSAENLRLQQSLDSGGQKAQALERELGQLEAENQALQRDLEALRLANRQLERAGQDRQALEQEVAQLEKDKKLLEKEARRLWQQVELKDAVLDDSSAKLSAAERESRALDRELARCRDAAGKLKELEKDNRDLTKQVTMHTRTLTTLREDLVQEKLKSQQLSSELDKLSQELEKLGLHKELLLRDDSSNGDTKYKILESINESAFKTTLARKEEKIVFLEAQMEEKASLNHHLQNELQVLKKECEILRKNQEEGKQVQNSFKHPVGPLVEGHPGKERWGPSPKEATMELLRVKDRAIELERNNAALQAEKQLLKEQLQHLETQNTAFSSQILALQKQSAFLQEHNTTLQTQTAKLQVENSTLSSQSASLTAQYALLQNQQTAKESEIENLQKQQEQLTAAYQALLQDHEHLGALHERQSAEYEALIRQHSCLKTLHRNLELGHKELGERHSDMLKHKAELDELEKVLNAEREALQQEQRTSAAAASENRRLQEELDRDKLNALRRHKEKLEEKIMDQYKFYDPAPKKKNHWIGAKALVKLIKPKKEGSRERLKSTTDSPPRQLESPDPTSPSASQPLRSQPENPEATPLGSSCAEERDIHNGTLGKGPGDLKPKQGSPHRDSLDRKDASADPAMKTWPVELGPRPCSSSAITTTPSSSTPISRHPGRTKGYNSDDSLCEPSLELEFAPHRQYASRPGSLESSRNASSDSSPLNLKGSSDQLHGRSESFSSEDLIPSRDTATLPRDASTPGRTALSRHEYPPPRNGPLPQEGARKRGAAQPHGGVRPCSASPSSEMVTLEEFLEESNRGSPSSDAPSCRDDLLSDYFRKASDLPAIVGQPGPPTRKEGAKMPTSFVAPTIKMPVTTSEGKPLKPGQYVKPNFRPTEAEALPSAPQRQAQPPQSLSLGRLRQAAMPPASHTPTGRSASLSRAFSLASADLLRASGPEACKQEPGGPEASGGRDTGSHSLQSSTPPSSHSLARERTPLVGKAGGSCQGPGPRSRPLDTRRFSLAPPKEERPAPLQQSATSPAIAAGGGSGSGSNSQFQHCSPAAAPAARTKPQASLHSGEAATIAPVRAGFSPSEGDGVLGQGHSEGLPAKGPGRSPDLAPHGSRASEDFSRGSSSKSTPASPEPAGDQQTVWYEYGCV*