Part of scaffold_1011 (Scaffold)

For more information consult the page for scaffold_1011 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BT.65397 ENSBTAG00000016471 (Cow)

Gene Details

pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021895, Cow)

Protein Percentage 94.53%
cDNA percentage 91.91%
Ka/Ks Ratio 0.08671 (Ka = 0.0267, Ks = 0.3075)

PDPR  (Minke Whale)

Gene Details

pyruvate dehydrogenase phosphatase regulatory subunit

External Links

Gene match (Identifier: BACU018187, Minke Whale)

Protein Percentage 93.62%
cDNA percentage 94.23%
Ka/Ks Ratio 0.37093 (Ka = 0.0448, Ks = 0.1208)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2637 bp    Location:142891..182336   Strand:+
>bmy_14552
ATGTTTTACTGGTTGCTGTCGGTGATCCGAAGACCAAGAAGCAGCCGAGGATGGCAGAAGTGGTCCTCAGCCAGAAGCGGTGCGTCAGCTGCCAAAGCGCATTCTGTGGCCCTGCCTGCCCAGGCACAGGTGGTCATCTGTGGTGGTGGAATCATGGGCACATCTGTGGCCTATCATCTCTCCAAGATGGGGTGGAAGGATATCGTCCTTTTGGAGCAGGGCAGGCTGGCTGCTGGCTCTACGAGGTTCTGTGCTGGCATCCTAAGCACCGCCAGGCACTTGACCATTGAGCAAAAGATGGCAGACTATTCAAACAAACTCTACCATCAGTTAGAGCAAGAAACAGGGATCCATACAGGTTACATAAGGACAGGCTCGATCTTTCTGGCCCAAACTCAGGACCGGCTGATCTCCCTGAAGCGCATCAATTCAAGGCTGAATGTTATAGGCATCCCCTCCGAGATCATCTCCCCCAAGAAAGTGGCSGAACTTCACCCTCTTCTCAATGTGCACGACCTGGTGGGGGCCATGCATGTCCCCGAGGATGCAGTGGTGTCCTCCGCTGATGTGGCTCTTGCCCTGGCAAGTGCTGCCTCCCAAAATGGTGTTCAGATCTATGACCGGACAAGTATTCTTCATGTTATGGTGAGGAAAGGTCAAGTCACTGGTGTGGAGACTGATAAAGGACAGATCCAGTGCCACTATTTTGTCAACTGTGCCGGTCAGTGGGCATACGAGCTGGGTCTGTCCAACGAGGAGCCGGTTAGTATCCCGTTACATGCCTGCGAACACTTCTACCTTCTGACTCGCCCCTGGGAGACCCCTCTGCAGAGCAACACACCAACTATTGTGGATGCCGATGGAAGAATTTATATTCGGAACTGGCAGGGTGGCATCCTGTCTGGGGGCTTTGAGAAGAACCCAAAACCAATTTTCACTGAGGGCAAGAACCAGCTGGAGATTCAGAATCTACAGGAAGACTGGGATCACTTTGAGCCCCTGTTGAGTTCCCTGCTGCGTAGGATGCCAGAACTGGAGACTCTGGAGATCATGAAGTTGGTGAATTGCCCGGAGACCTTCACCCCGGACATGAGGTGCATCATGGGCGAGTCCCCTTCAGTGCGGGGCTACTTCGTCCTGGCGGGAATGAACTCTGCTGGCCTTTCGTTTGGTGGAGGAGCTGGAAGGTACCTCGCTGAGTGGATGGTGCACGGCTATCCCTCAGAAAGTGTCTGGGAACTGGACCTGAAGCGTTTTGGAGCCCTCCAGAGCAGCCGGACCTTCCTGCGCCACCGTGTCATGGAAGTCATGCCTCTGCTGTACGATCTGAAGGTTCCCCGTTGGGACTTCCAGACAGGAAGGCAGTTACGCACATCTCCTCTGTATGACCGGCTGGATGCACAAGGAGCCAGGTGGATGGAGAAACATGGATTTGAGAGGCCAAAGTACTTTGTGCCACCAGACAAGGACCTCTTGGCCTTGGAGCAGAGCAAGACTTTTTACAAGCCGGACTGGTTTGAGATTGTGGAGTCCGAAGTCAAGTGCTGTAAGGAGGCCGTGTGTGTCATTGACATGTCCTCTTTCACAAAGTTTGAAATAACATCCACCGGGGATCAGGCGTTAGAAATTCTCCAATACCTCTTCTCCAATGACCTTGATGTGCCCGTGGGCCACATCGTGCATACCGGCATGCTCAACGAGGGTGGAGGGTACGAAAATGACTGCAGCATAGCGCGGCTGAGCAAGCGCAGTTTCTTCATGATTTCTCCAACCGACCAGCAGGTCCACTGTTGGGCCTGGCTTAAGAAATACATGCCAGAAGACAGCAACCTGATTCTGGAGGACGTCACCTGGAAATACACTGCCCTCAATCTGATTGGTCCTCGAGCTGTGGATGTGCTGTCTGAGTTGTCCTATGCTCCTATGACTCCAGACCATTTCCCAAGTCTGTTTTGCAAGGAGATGAGCGTGGGCTACGCAAATGGGATCCGGGTGATGAGCATGACTCACACAGGAGAGCCAGGATTCATGCTTTATATTCCTATAGAGTACGCCCTGCACGTATACAACGAAGTGATGAGTGTTGGACAGAAATATGGAATCCGGAATGCTGGGTATTATGCTCTTCGTAGTCTCCGAATTGAAAAGTTTTTTGCCTTCTGGGGCCAGGATTTAAACACCCTCACCACACCCCTGGAATGCGGACGAGAGTCTCGGGTGAAGTTAGACAAGGGGATGGATTTCATTGGGCGAGATGCCCTGCTGCAGCAGAAGCAGAACGGGGTGTACAAACGCCTCACTATGTTCATCCTGGACGACCACGACACGGACCTGGACCTCTGGCCTTGGTGGGGGGAGCCCATTTACCGAAACGGGCAGTACGTGGGCAAGACCACCAGCAGCGCATATGGTTACACCCTGGAGCGCCACGTGTGCCTGGGCTTTGTGCACAATTTTTCCGAGGACACCGGAGAAGAGCAGGTGGTGACAGCAGATTTCATCAACCGGGGAGAATATGAGATTGACATCGCAGGACACCGGTTCCAGGCCAAGGCCAAGCTCTACCCGGTCACCTCCCTCTTCACCCATAAGCGCCGAAAGGATGACGTGGAGCTAAGTGACTTGCACGGGAAGTAA

Related Sequences

bmy_14552T0 Protein

Length: 879 aa      View alignments
>bmy_14552T0
MFYWLLSVIRRPRSSRGWQKWSSARSGASAAKAHSVALPAQAQVVICGGGIMGTSVAYHLSKMGWKDIVLLEQGRLAAGSTRFCAGILSTARHLTIEQKMADYSNKLYHQLEQETGIHTGYIRTGSIFLAQTQDRLISLKRINSRLNVIGIPSEIISPKKVAELHPLLNVHDLVGAMHVPEDAVVSSADVALALASAASQNGVQIYDRTSILHVMVRKGQVTGVETDKGQIQCHYFVNCAGQWAYELGLSNEEPVSIPLHACEHFYLLTRPWETPLQSNTPTIVDADGRIYIRNWQGGILSGGFEKNPKPIFTEGKNQLEIQNLQEDWDHFEPLLSSLLRRMPELETLEIMKLVNCPETFTPDMRCIMGESPSVRGYFVLAGMNSAGLSFGGGAGRYLAEWMVHGYPSESVWELDLKRFGALQSSRTFLRHRVMEVMPLLYDLKVPRWDFQTGRQLRTSPLYDRLDAQGARWMEKHGFERPKYFVPPDKDLLALEQSKTFYKPDWFEIVESEVKCCKEAVCVIDMSSFTKFEITSTGDQALEILQYLFSNDLDVPVGHIVHTGMLNEGGGYENDCSIARLSKRSFFMISPTDQQVHCWAWLKKYMPEDSNLILEDVTWKYTALNLIGPRAVDVLSELSYAPMTPDHFPSLFCKEMSVGYANGIRVMSMTHTGEPGFMLYIPIEYALHVYNEVMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQDLNTLTTPLECGRESRVKLDKGMDFIGRDALLQQKQNGVYKRLTMFILDDHDTDLDLWPWWGEPIYRNGQYVGKTTSSAYGYTLERHVCLGFVHNFSEDTGEEQVVTADFINRGEYEIDIAGHRFQAKAKLYPVTSLFTHKRRKDDVELSDLHGK*