Part of scaffold_1004 (Scaffold)

For more information consult the page for scaffold_1004 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CEP170 ENSTTRG00000006914 (Bottlenosed dolphin)

Gene Details

centrosomal protein 170kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006543, Bottlenosed dolphin)

Protein Percentage 90.76%
cDNA percentage 91.06%
Ka/Ks Ratio 0.36612 (Ka = 0.0259, Ks = 0.0707)

CEP170 ENSBTAG00000007566 (Cow)

Gene Details

centrosomal protein of 170 kDa

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009955, Cow)

Protein Percentage 92.85%
cDNA percentage 93.61%
Ka/Ks Ratio 0.27127 (Ka = 0.0426, Ks = 0.1572)

CEP170  (Minke Whale)

Gene Details

centrosomal protein 170kDa

External Links

Gene match (Identifier: BACU009617, Minke Whale)

Protein Percentage 98.19%
cDNA percentage 98.43%
Ka/Ks Ratio 0.43032 (Ka = 0.0125, Ks = 0.029)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 4323 bp    Location:43892..152795   Strand:+
>bmy_14577
ATGATTTTTGTTGGAAGAGATGACTGTGAGCTCATGTTGCAGTCTCGTAGTGTGGATAAGCAACATGCTGTAATCAATTACGATGCCTCTACTGATGAACATTTGGTGAAAGATTTGGGCAGCCTAAATGGGACTTTTGTGAATGATGTAAGAATTCCAGAACAGACTTATATCACCTTGAAACTTGAAGATAAGTTGAGATTTGGATATGATATCCTTATTGATTTTGTGCATTTATTAAATTTATTCAAAAATCTTTACTCCGGTCACGAGAAGTTTACCATTCAGCTTCAATTGTCCCAAAAATCTTCAGAATCAGAATTATTGAAATCTGCATGTGCCAAAAGCATAGATTCAAAGGTAGCAGATACCGCGGCAGAAGTGCCACACAAAGCTACAGAAGCACTAAAATCTGAGGAAAAAGCCATAGATACTTCTGCTATGCCCCGTGGTACTCCATTATATGGGCAGCCATCATGGTGGGGGGATGATGAGGTGGATGAACAAAGAGCTTTCAAGTCAAATGGCAAACCTGAAGAGAAAAATCATGAAACTGGAACATCAGGGTGCAGCATAGATGCCAAGCAAGTTGAGGAACAATCTGCAGCTGCAAATGAAGAAGTACTTTTTCCTTTCTGTAGGGAACCAAGTTATTTTGAAATCCCTACAAAAGAATTTCAGCAACCATCACAAATAACAGAGAGTACTATTCATGAAATCCCAACAAAAGACACACCAAGTTCTCATACAACAGGTGCAGGGCATGCTTCATTTACCATTGAATTTGATGACAGTACCCCAGGGAAAGTAACTATTAGAGATCATGTGACAAAATTTACTTCTGATCAGCGCCACAAATCAAAGAAGTCTTCTCCTGGAACTCAAGACCTGCCAGGGATTCAAACTGGAATGATGGCACCGGAAAACAAAGTAGCTGACTGGCTAGCACAGAACAACCCTCCTCAGATGGTATGGGAAAGATCAGAAGAGGATTCCAAAAGTATTAAAAGTGATGTTCCAGTTTACTTAAAAAGGTTGAAAGGAAATAAACATGATGATGGTACACAAAGCGACTCAGAAAATGCTGGGGCTCACAGGCGCTGTAGCAAACGTGCAACTCTTGAGGAACACTTAAGGCGCCACCATTCAGAACAGAAAAAGCTACAGAAGGCCCAGGCTACTGAAAAGCATCAAGACCAAGCTGTTGATAATGATGATGACCAAAGTGACAAGGGTACTTATACCATTGAGTTAGAGAATCCCAACAGTGAGGAAGTGGAAGCAAGAAAAATGATTGACAAGGTATTTGGAGTAGATGACAATCAAGATTATAATAGGCCTGTTATCAAAGAAAAACATAAAGATCTGGTAAAAGATTGGGCTCTCAATTCTGCTGCAGTAGTAATGGAAGAAAGAAAACCACTGAGTACACCTGGATTTCACAGCTCAGAGGAAGGCACATCTTCATCTGGAAACAAGCGTTGGGTTTCACAATGGGCTAGTTTGGCTGCCAATCATACAAGGCATGATCAAGAAGAAAGGATAATGGAGTTGTCTGTACCTGTTTCTTTAGAGAATGATACAGATATCAGTGAATCTGGCCTTTCAGTGAGAAGTACTGGCTCAGCAACTTGCTTGGCTAGTCAGGGAGAGAGAAAGAGACGAACCCTTCCCCAGCTTCCAAATGAAGAGAAGTCTCTTGAGAGCTCCAGAACAAAGGTTATAGCACAGAGGTCAGAGATAGGAGAAAAGCAAGACACGGAACTTCAGGAGAAAGAAGCACCTACACAGGTATACCAGAAAGATAAACAGGATGCTGAGAGAGCCCTGAGTAAAATGAACAGGGCAGTAAATGGTGAGACTCTTAAAAGTGGTGGAGATAATAAAACCCTGCTTCACTTAGGCAGCTCTTATTCTGGAAAGGAGAAAAGTGAAACTGATAAGGAAGCTTCTTTTGTAAAGCAAACATTAGCTAAAATCCAGCAACAAGAACAAAAGGAACAGGCACAGTGGACACCTACTAAATTATCTTCTTCAAAAAATATTTCAGGTCAGATAGATAGATGTAGGGAGGAACCTTTTAAACAGGAGTCACAACCTCAAGAAAAAATTCCAGGACTTTCTACAAGCAAAGGAGAAAGAGTGATACAAAAGGAGGGTAAGCGAAGAAAAGCTGAGGAAATTCTGAAAAGTCAGACTTCAAAGGGAGGAGACAAGAAGGAATCCTCCAAGTCATTAGTGCGGCAAGGAAGCTTCACTATAGAGAAACCTAGCCCCAACATACCCATAGAACTTATTCCCCATATAAATAAACAGGCTTCATCTACATCCTCTTCTTTAGCGTTAACAACTGCCAGCAGAATACGAGAAAGAAGTGATTCTATGGATACTGATTCTAGTTTGGACACAACCCTTATTCTAAAAGACACAGAAGCAGTAATGGCTTTTCTAGAAGCTAAACTGCGTGAAGATAATAAAACTGATGAAGGCCCAGATACTCCCAGTTATAACAGAGACAACTCCATTTCACCTGAATCTGATGTGGACACAGCTAGTACCATCAGTCTGGTTACTGGAGAGACTGAAAGAAAGTCAACCCAAAAGCGAAAGAGTTTCACTAGTCTCTATAAAGATAGGTGTTCCACAGGTTCTCCTTCCAAAGATGTTACAAAGTCATCATCTTCAGGTGCTAGGGAGAAAATTGAAAAGAAAACAAAAAGTCGTTCCACAGATGTAGGTTCTAGGGCAGAGGGTCGTAAATTTGTGCAGTCCAGTGGAAGAATAAGGCAGCCTTCAGTAGATTTAACAGATGATGACCAAACCTCTAGTGTACCTCATTCAGCCATCTCTGATGTTATGTCGTCTGATCAGGAAACTTACTCTTGTAAATCTCACGGAAGGACTCCACTTACCTCAACGGATGAGCATGCACATTCCAAACTGGAAGGAAGTAAAGTAACTAAGTCCAAGACTTCTCCTGGAGCACCTGGTGCATCCAGTAAATCAACCACTCTCCCAAGGCCACGACCCACCAGGACTTCCCTCTTGCGCAGAGCCCGACTTGGTGAAGCTTCAGACAGTGAACTCGCCGATGCTGACAAAGCATCTGTGGCTTCTGAAGTGTCCACAACAAGTTCGACATCGAAACCTCCCACAGGAAGGCGTAACATTTCTAGGATTGATTTGTTAGCTCAGCCTCGTAGAACAAGGCTTGGCTCATTATCAGCTCGCAGTGACTCTGAAGCAACAATCTCTAGAAGCAGTGCCTCTTCACGGACCGCAGAAGCCATCATTAGAAGTGGAGCCAGATTAGTACCTTCAGATAAATTTTCTCCTAGAATTAGAGCTAACAGTATCTCTCGACTCTCTGACTCCAAGGTCAAAAGTATGACCTCAACACATGGCTCTCCTTCAGTAAATTCAAGATGGAGGCGCTTTCCTACTGATTATGCTTCCACCTCAGAAGATGAATTTGGATCAAACCGTAATTCCCCTAAACATACCCGTCTACGTACTTCTCCAGCCCTGAAAACGACTCGATTGCAGAGCTCTGGGTCAGCAATGCCTACTAGTTCTTCATTCAAACACCGGATAAAAGAACAGGAAGACTACATCCGAGATTGGACTGCTCATCGAGAAGAAATAGCCAGGATCAGCCAAGATCTTGCTCTCATTGCTCGGGAAATCAACGATGTAGCAGGAGAGATAGATTCAGTGACTTCATCAGGCACTGCCCCTAGTACCACAGTAAGCACTGCTGCCACCACCCCTGGCTCTGCCATAGACACTAGAGAAGAGGTCATGGGAGATAATCTGCTGCTGTCATCTGTCTTTCAGTTTTCTAGGAAGATAAGACAGTCCATAGATAAGACAGCTGGAAAGATCAGAATATTATTTAAAGACAAAGATCGGAATTGGGATGAAATAGAAAGCAAGTTAAGAGCTGAAAGTGAAGTCCCTATTGTGAAAACCTCAAGCATGGAGATTTCTTCTATCTTACAGGAGCTAAAAAGAGTTGAAAAGCAGCTACAAGCAATCAATGCTATGATTGACCCAGATGGAACTCTGGAAGCTCTGAACAACATGGGATTTCCCAGTGCTATCTTGCCATCTCCATCAAAACAGAAGTCCAGTCCTGTGAATAACCACAGCAGCCCGGGTCAGACACCGACACTTTGCCAACCAGAAGCTAGGGTTCTTCATCCTGCTGCTGTTTCAGTCTCAGCTGAGTTTGAGAATGCCGAATCTGAGGCTGATTTCAGTATACATTTCAATAGGTTCAACCCTGATGGGGAAGAGGAAGATGTTACAGTACATGAATGA

Related Sequences

bmy_14577T0 Protein

Length: 1441 aa      View alignments
>bmy_14577T0
MIFVGRDDCELMLQSRSVDKQHAVINYDASTDEHLVKDLGSLNGTFVNDVRIPEQTYITLKLEDKLRFGYDILIDFVHLLNLFKNLYSGHEKFTIQLQLSQKSSESELLKSACAKSIDSKVADTAAEVPHKATEALKSEEKAIDTSAMPRGTPLYGQPSWWGDDEVDEQRAFKSNGKPEEKNHETGTSGCSIDAKQVEEQSAAANEEVLFPFCREPSYFEIPTKEFQQPSQITESTIHEIPTKDTPSSHTTGAGHASFTIEFDDSTPGKVTIRDHVTKFTSDQRHKSKKSSPGTQDLPGIQTGMMAPENKVADWLAQNNPPQMVWERSEEDSKSIKSDVPVYLKRLKGNKHDDGTQSDSENAGAHRRCSKRATLEEHLRRHHSEQKKLQKAQATEKHQDQAVDNDDDQSDKGTYTIELENPNSEEVEARKMIDKVFGVDDNQDYNRPVIKEKHKDLVKDWALNSAAVVMEERKPLSTPGFHSSEEGTSSSGNKRWVSQWASLAANHTRHDQEERIMELSVPVSLENDTDISESGLSVRSTGSATCLASQGERKRRTLPQLPNEEKSLESSRTKVIAQRSEIGEKQDTELQEKEAPTQVYQKDKQDAERALSKMNRAVNGETLKSGGDNKTLLHLGSSYSGKEKSETDKEASFVKQTLAKIQQQEQKEQAQWTPTKLSSSKNISGQIDRCREEPFKQESQPQEKIPGLSTSKGERVIQKEGKRRKAEEILKSQTSKGGDKKESSKSLVRQGSFTIEKPSPNIPIELIPHINKQASSTSSSLALTTASRIRERSDSMDTDSSLDTTLILKDTEAVMAFLEAKLREDNKTDEGPDTPSYNRDNSISPESDVDTASTISLVTGETERKSTQKRKSFTSLYKDRCSTGSPSKDVTKSSSSGAREKIEKKTKSRSTDVGSRAEGRKFVQSSGRIRQPSVDLTDDDQTSSVPHSAISDVMSSDQETYSCKSHGRTPLTSTDEHAHSKLEGSKVTKSKTSPGAPGASSKSTTLPRPRPTRTSLLRRARLGEASDSELADADKASVASEVSTTSSTSKPPTGRRNISRIDLLAQPRRTRLGSLSARSDSEATISRSSASSRTAEAIIRSGARLVPSDKFSPRIRANSISRLSDSKVKSMTSTHGSPSVNSRWRRFPTDYASTSEDEFGSNRNSPKHTRLRTSPALKTTRLQSSGSAMPTSSSFKHRIKEQEDYIRDWTAHREEIARISQDLALIAREINDVAGEIDSVTSSGTAPSTTVSTAATTPGSAIDTREEVMGDNLLLSSVFQFSRKIRQSIDKTAGKIRILFKDKDRNWDEIESKLRAESEVPIVKTSSMEISSILQELKRVEKQLQAINAMIDPDGTLEALNNMGFPSAILPSPSKQKSSPVNNHSSPGQTPTLCQPEARVLHPAAVSVSAEFENAESEADFSIHFNRFNPDGEEEDVTVHE*