Sequence detailsbmy_14869 (Coding sequence)

Part of scaffold_1057 (SequenceType object (1))

For more information consult the page for scaffold_1057 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TTC4ENSTTRG00000021463 (Bottlenosed dolphin)

Gene Details

tetratricopeptide repeat domain 4

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000016555, Bottlenosed dolphin)

Protein Percentage 81.54%
cDNA percentage 86.32%
Ka/Ks Ratio 0.66672 (Ka = 0.1397, Ks = 0.2096)

TTC4ENSBTAG00000015931 (Cow)

Gene Details

tetratricopeptide repeat protein 4

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000021186, Cow)

Protein Percentage 92.16%
cDNA percentage 94.12%
Ka/Ks Ratio 0.21532 (Ka = 0.0353, Ks = 0.1638)

Additional orthologs identified in other species via the OPTIC pipeline.

TTC4 (Human)   Ttc4 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 594 bp    Location:492288..499430   Strand:+
Raw sequence 
>bmy_14869
ATGGAGCGGCCGGAGCCGGATGCGGCCTCTGATGACGCCATGGACTCGTTCCTGGAAAAGTTCCAGACCCAACCTTACCGCGGCGGGTTCCAAGAGGACCAGTGGGAGGAGGAATTTGAAAAGATCCCCCTATTTATGAAGAAAGCGCCATCAGAAATTGATCCCCAGGAGAATCCTGACTTGGCTTGCCTGCAGTCAATTATTTTTGATGAAGAGCGATCTCCAGAAGAACAGGCCAGGACCTTTAAAGACGAGGGCAATGATTACTTTAAAGAAAAAGACTATAAGAAAGCTGTGATTTCGTACACTGAAGGATTAAAGAAGAAATGTGCAGACCCTGATTTGAATGCTATTCTTTATTCCAACCGGGCAGCAGCACAGTACTATCTGGGCAATTTTCGTTCTGCTCTCAATGATGTGACAGCTGCCAGAAAGCTAAAACCCTGCCACCTGAAAGCAATAGTAAGAGGTGCCTTATGCCATCTGGAACTGAAAAACTATGTCGAGGCTGTGAACTGGTGCGATGAGGGGCTGCAGATAGATGCCACAGAGAAGAAGCTTCTGGAAATGAGGGCTAAAGCAGACAAGTTGAAG

Related Sequences

bmy_14869T0 SequenceType object (3)

Length: 198 aa      View alignments
>bmy_14869T0
MERPEPDAASDDAMDSFLEKFQTQPYRGGFQEDQWEEEFEKIPLFMKKAPSEIDPQENPDLACLQSIIFDEERSPEEQARTFKDEGNDYFKEKDYKKAVISYTEGLKKKCADPDLNAILYSNRAAAQYYLGNFRSALNDVTAARKLKPCHLKAIVRGALCHLELKNYVEAVNWCDEGLQIDATEKKLLEMRAKADKLK