Part of scaffold_1057 (Scaffold)

For more information consult the page for scaffold_1057 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TTC22 ENSTTRG00000000714 (Bottlenosed dolphin)

Gene Details

tetratricopeptide repeat domain 22

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000673, Bottlenosed dolphin)

Protein Percentage 90.13%
cDNA percentage 93.16%
Ka/Ks Ratio 0.26916 (Ka = 0.0526, Ks = 0.1954)

TTC22 ENSBTAG00000017132 (Cow)

Gene Details

tetratricopeptide repeat protein 22

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022771, Cow)

Protein Percentage 85.75%
cDNA percentage 88.43%
Ka/Ks Ratio 0.16943 (Ka = 0.0793, Ks = 0.4679)

TTC22  (Minke Whale)

Gene Details

tetratricopeptide repeat domain 22

External Links

Gene match (Identifier: BACU000234, Minke Whale)

Protein Percentage 91.52%
cDNA percentage 93.14%
Ka/Ks Ratio 0.23884 (Ka = 0.0497, Ks = 0.2083)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1170 bp    Location:563315..556236   Strand:-
>bmy_14872
ATGGCGCCAAAGGGGAGAAGCGGGGGAGAGAGAATCGGTGACTGGTGGAGTGTGGGCCCTGCGATCCCGAAGGAGGAAAAAAGGGGCTGGTACTTCACCATGGCAACGCTCTTCATCAGGTTAGATGGCATCTTCCTGGAGCTGGGCAGCGAGGAGCAGAAGAGGTTGCCGGCCTTCAACCGCACGCTGGCCCTGCTCCGGCAAACCCCTCTCCCGGCCTCACCCCCAGCTCTGGCCTGGTGCTACCTCGGGATGCTGCTGGAGAGGAAGGACACCTTCTCCATCACCCCCATGGGCGTCCATGACTGCGGGTTTTCAGGGACCGACCCCCTGGACTGCTTTGGCAAGGCCATTGAGATTGCCAAGGACCAACCCTCCATCCTGAATCACCTGGCCAAAATCTTCCACTTCCTTGGAAAGCAGGATATGGCCATTGGTACCTGCAACATAGCCCTGGACATCCTACGAGATCCGGAGCTCAACTGGCAGGCGTATTGCACAAGGGCCAAGATCCACGTCAGAGCCTACCTGCATGACCTGGAGCGAAGCAAGATGGGGCTCGGGGGCATGCCTGACAGGAACCACCTGGCCTGCGCCAAGGCCGACCTCGAGGAAGTGGTCAAGGTCTACTACTACATGGGCGTGGACGCTGTGCAGGAGCTGCTGGCGGTGGACGAGGCGGCGCTGAACCAGGCGCTGGTCTTCCTGGCCAAGGCCGGCGAGTCGGAGCTGGGCGCCACGCTGCCCGAGCTGCAGCTGTTGCGCGGCAAGTGCCTGCGTATCAAAGGCGAGGAGGCCAACGCGGTGGCCTGCTTCAAGCGCGCCGTGGAGCTGGACGACGCGGGCTCCAGCCACACCGAGGCCTTCGGCTGCCTGCTCGAGGCGCTCCTGGCGCAGTGGAGCCAGGCGCAGCTCAGCGACGGCGAGCTGGGCAGCGAGGTGGACGCGTGGCTGCGCTGCGCCCAGGACAAGTACCCGGCGGCGCGCCTGCGCCAGGAGCTGCAGCGCGTGTGGCGCGGCCACACGGGCGAGGTGCTGGGGCTGGCCCGGGCCTTAGTGGTGCAGGGACGGCCGGCACTGGTGCGTCTGCTCTTCGAGACCATGGCGCGCGAGGGCGAGGGCACGGGCCCAAGACGGGGCCGCCGCGCGTTCTCCCTCGGAGGTCCCTGA

Related Sequences

bmy_14872T0 Protein

Length: 390 aa      View alignments
>bmy_14872T0
MAPKGRSGGERIGDWWSVGPAIPKEEKRGWYFTMATLFIRLDGIFLELGSEEQKRLPAFNRTLALLRQTPLPASPPALAWCYLGMLLERKDTFSITPMGVHDCGFSGTDPLDCFGKAIEIAKDQPSILNHLAKIFHFLGKQDMAIGTCNIALDILRDPELNWQAYCTRAKIHVRAYLHDLERSKMGLGGMPDRNHLACAKADLEEVVKVYYYMGVDAVQELLAVDEAALNQALVFLAKAGESELGATLPELQLLRGKCLRIKGEEANAVACFKRAVELDDAGSSHTEAFGCLLEALLAQWSQAQLSDGELGSEVDAWLRCAQDKYPAARLRQELQRVWRGHTGEVLGLARALVVQGRPALVRLLFETMAREGEGTGPRRGRRAFSLGGP*