Part of scaffold_1049 (SequenceType object (1))

For more information consult the page for scaffold_1049 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

STARD13ENSTTRG00000012437 (Bottlenosed dolphin)

Gene Details

StAR-related lipid transfer (START) domain containing 13

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011803, Bottlenosed dolphin)

Protein Percentage 97.9%
cDNA percentage 97.4%
Ka/Ks Ratio 0.13387 (Ka = 0.0091, Ks = 0.0683)

STARD13ENSBTAG00000021815 (Cow)

Gene Details

stAR-related lipid transfer protein 13

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000029081, Cow)

Protein Percentage 93.83%
cDNA percentage 91.78%
Ka/Ks Ratio 0.09894 (Ka = 0.0287, Ks = 0.29)

STARD13 (Minke Whale)

Gene Details

StAR-related lipid transfer (START) domain containing 13

External Links

Gene match (Identifier: BACU015753, Minke Whale)

Protein Percentage 99.4%
cDNA percentage 98.55%
Ka/Ks Ratio 0.04727 (Ka = 0.0021, Ks = 0.0434)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 2061 bp    Location:30860..6337   Strand:-
>bmy_14965
ATGGCGTCCTGCCACAGAGCAAGTCGAGTTAGCGTCTACGACAACGTCCCCGGCTCCCACCTGTATGCCAGCACCGGGGATCTTTTGGACTTGGAGAAGGAYGATCTCTTCCCTCACTTAGATGACATTCTGCATCATGTCAACGGGCTCCAAGAGGTAGTGGATGACTGGTCCAAAAACCTGTTACCTGAACTGCAGACACATAATGCACTGGCCGGAGAAGCTGGCTTCTGCCCCTTCCCCCCTCCTAGTCAGATCACCTTAGATTTCGAGGGCAATTCTGTCTCCGAAGGTCGGACAACACCCAGTGATGTGGAAAGAGATGGAGCGTCTCTTAATGAATCAGAGGCYGCTGGAGTCAGAGAAAGGAGGGACTCTGGAGTAGGGGCCTCTCTGACCAGGCCAAACAGGCGACTCCGGTGGAACAGCTTCCAGCTCTCACACCAGCCGCAGCCGTCCACGGCATCGCCCCACATCAGCGGTCAGACAGCCGGCCAGCTGAACCTGCTCCAGCGCTTCTCGCTGCTTCGCCTCACGGCCATCATGGAGAAGCACTCCATGTCCAACAAACACGGCTGGACATGCCTGTCCCCACAGTGTGCTCCACGAGGCGTGCATGACCTGCTTTCTGTGAATTCTAGGGCAGTTCCAAAGTTCATGAAGAGGATGAAAGTTCCTGATTACAGAGACAAGACAGTCTTTGGCATTCCTCTCATCGTTCACGTCCAGAGAACGGGGCAGCCTCTGCCACAGAGTATCCAGCAAGCCCTGAGGTATCTACGCAGCAACTGCCTCGATCAGGTGGGTCTTTTTCGAAAATCAGGCGTGAAGTCTCGAATCCATGCCTTACGTCAAATGAACGAGAGCTTTCCTGAGAACGTCAGCTACGAGGACCAATCCGCTTACGACGTGGCGGATATGGTGAAGCAGTTCTTCCGGGACCTTCCTGAGCCTCTTTTCACCAACAAGCTCAACGAGACCTTCCTCCACATCTATCAGTACGTCCCCAAAGAGCAGCAGTTGCAGGCAGTGCAGGCGGCYGTCCTGCTGCTGGCCGATGAGAGCAGGGAGGTGCTGCAGACGCTGCTGTGCTTCCTCAACGACGTGGTCCACGCGGTGGAGGAGAATCAGATGACGCCCATGAACCTGGCTGTGTGTCTGGCCCCCTCCCTCTTCCATCTGAATTTACTGAAGAAGGAAAGCTCCCCCAGAGTTAGCCAGAAGAAATATGCCTCCGGGAAGCCAGATCAAAAAGACCTCAGTGAGAATCTGGCCGCAGCTCAGGGGCTGGCCCACATGATCATGGAATGCGACAGACTTTTTGAGGTCCCGCTTGAGATGGTGGCCCAGTCTCATAACTCATATATGGAGGCTGMGATGCATCCCCCAACTCTGGAAGACCTGGGGGCCCAGATGGAGGAGAGCGGGGCCACTTTCCACACGTACCTGGAGCATCTCATCCAGGGCCTCCAGAAGGAAGCCAAGGAAAAGTTCAAAGGATGGGTCACGTGTTCCAACACRGACAACACAGATCTTGCTTTCAAAAAGGTGGGAGACGAGCATCCGCTGAGGCTGTGGAAGGCTTCTGTGGAGGTGGAAGCGCCCCCCTCGGTGGTTTTGAATCGCGTGCTGAGGGAGCGCCACCTGTGGGATGAGGATTTCGTGCAGTGGAAGGTGGTGGAAACGCTGGACAAGCAAACGGAAATCTACCAGTACGTGCAGAACAGCATGGCGCCTCACCCTTCCAGAGACTTCCTGGTTCTCAGGACCTGGAAGACTGATTTGCCCAAAGGAATGTGCACCCTGGTGTCCCTCTCTGTGGAGCACGAGGAAGCCCAGCTCATGGGTGGTGTGCGGGCCGTGGTGATGGACTCTCAGTACTTAATGGAGCCGTGTGGGTCCGGCAAGTCGAGGCTGACCCACATCTGCAGGGTGGACCTGAGAGGTCACTCCCCAGAATGGTACAATAAAGGCTTTGGACATCTGTGTGCAGCGGAAGTTGCCAGGATTAGAAACTCTTTTCAGCCCCTCATTGCTGAGGGTCCAGAAACTAAAATCTGA

Related Sequences

bmy_14965T0 SequenceType object (3)

Length: 687 aa      View alignments
>bmy_14965T0
MASCHRASRVSVYDNVPGSHLYASTGDLLDLEKDDLFPHLDDILHHVNGLQEVVDDWSKNLLPELQTHNALAGEAGFCPFPPPSQITLDFEGNSVSEGRTTPSDVERDGASLNESEAAGVRERRDSGVGASLTRPNRRLRWNSFQLSHQPQPSTASPHISGQTAGQLNLLQRFSLLRLTAIMEKHSMSNKHGWTCLSPQCAPRGVHDLLSVNSRAVPKFMKRMKVPDYRDKTVFGIPLIVHVQRTGQPLPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQMNESFPENVSYEDQSAYDVADMVKQFFRDLPEPLFTNKLNETFLHIYQYVPKEQQLQAVQAAVLLLADESREVLQTLLCFLNDVVHAVEENQMTPMNLAVCLAPSLFHLNLLKKESSPRVSQKKYASGKPDQKDLSENLAAAQGLAHMIMECDRLFEVPLEMVAQSHNSYMEAXMHPPTLEDLGAQMEESGATFHTYLEHLIQGLQKEAKEKFKGWVTCSNTDNTDLAFKKVGDEHPLRLWKASVEVEAPPSVVLNRVLRERHLWDEDFVQWKVVETLDKQTEIYQYVQNSMAPHPSRDFLVLRTWKTDLPKGMCTLVSLSVEHEEAQLMGGVRAVVMDSQYLMEPCGSGKSRLTHICRVDLRGHSPEWYNKGFGHLCAAEVARIRNSFQPLIAEGPETKI*