Sequence details bmy_15008 (Coding sequence)

Part of scaffold_1079 (Scaffold)

For more information consult the page for scaffold_1079 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SCIN ENSTTRG00000005932 (Bottlenosed dolphin)

Gene Details

scinderin

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005613, Bottlenosed dolphin)

Protein Percentage 95.34%
cDNA percentage 97.22%
Ka/Ks Ratio 0.49793 (Ka = 0.0178, Ks = 0.0358)

SCIN ENSBTAG00000009786 (Cow)

Gene Details

Adseverin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012910, Cow)

Protein Percentage 92.68%
cDNA percentage 93.9%
Ka/Ks Ratio 0.20936 (Ka = 0.0327, Ks = 0.1562)

SCIN  (Minke Whale)

Gene Details

scinderin

External Links

Gene match (Identifier: BACU000482, Minke Whale)

Protein Percentage 98.54%
cDNA percentage 98.86%
Ka/Ks Ratio 0.21521 (Ka = 0.0048, Ks = 0.0222)

Additional orthologs identified in other species via the OPTIC pipeline.

SCIN (Human)   Scin (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1233 bp    Location:583357..543360   Strand:-
Raw sequence 
>bmy_15008
ATGGCTAAACTCTACATGGTTTCAGATGCCAGTGGCTCCATGAAAGTGAGCATGGTGGCAGAAGAAAACCCCTTCTCCATGACGATGCTGCTTTCTGAAGAATGCTTCATTTTGGACCACGGTGCTGCAAAACAGATTTTTGTATGGAAAGGTAGAGATGCTAATCCCCAGGAGAGAAAGGCTGCCATGAAGACAGCTGAAGAATTCCTAGAACAAATGCATTATTCTACTAATACTCAGATTCAAGTTCTTCCAGAAGGAGGTGAAACACCAATCTTCAAACAGTTCTTTAAGGACTGGAGAGATAAAGATCAGAGTGATGGCTTTGGGAAAGTATATGTCACAGAGAAAGTGGCTCAAATAAAACAAATTCCATTTGATSCCTCAAAATTACACAGTTCTCCACAAATGGCAGCCCAGCATAATATGGTGGATGATGGTTCCGGCAAAGTGGAGATTTGGCGTRTAGAAAACAATGGTAGGATCGAAATTGACCGAAACTCGTATGGTGAATTCTATGGTGGTGACTGCTACATTATACTCTACACTTATCCCAGAGGACAGATTATCTACACCTGGCAAGGAGCAAATGCCACGAGGGATGAGCTGACGACCTCCGCCTTCCTGACCGTTCAGTTGGATAGATCCCTTGGAGGACAGGCTGTGCAGATCCGAGTCTCCCAAGGCAAAGAACCTGCTCACCTGCTGAGTTTGTTCAAAGACAAACCGCTCATTATTTACAAGAACGGAACATCAAAGAAAGGAGGTCAGGTGCCGGCCCCCCCTACACGCCTCTTTCAAGTCCGAAGAAACCTGGCATCGATCACCAGAATTGTGGAGGTAGATGTTGATGCAAAGTCATTGAATTCCAATGATGCTTTTGTCCTGAAACTACGACAAAATAATGGCTACATCTGGAGAGGAAAAGGGGCCAGCCAGGAGGAGGAGAAGGGAGCAGAGTACGTGGCAAGTGTCCTCAAATGTAAAACCACGAGGATTCAGGAAGGCGAGGAACCAGAGGAGTTTTGGAATTCCCTTGGAGGGAAAAAAGACTACCAGACCTCTCCCCTGCTAGAAACCCAGGCTGAAGACCATCCACCTCGGCTTTACGCCTGCTCCAACAAAACTGGAAGATTCTTTGTTGAAGAGGTTCCAGGAGAGTTCACCCAGGATGATTTAGCAGAAGATGATGTCATGTTACTAGATGCTTGGGAACAGATTGGACATGAATAG

Related Sequences

bmy_15008T0 Protein

Length: 411 aa      View alignments
>bmy_15008T0
MAKLYMVSDASGSMKVSMVAEENPFSMTMLLSEECFILDHGAAKQIFVWKGRDANPQERKAAMKTAEEFLEQMHYSTNTQIQVLPEGGETPIFKQFFKDWRDKDQSDGFGKVYVTEKVAQIKQIPFDXSKLHSSPQMAAQHNMVDDGSGKVEIWRXENNGRIEIDRNSYGEFYGGDCYIILYTYPRGQIIYTWQGANATRDELTTSAFLTVQLDRSLGGQAVQIRVSQGKEPAHLLSLFKDKPLIIYKNGTSKKGGQVPAPPTRLFQVRRNLASITRIVEVDVDAKSLNSNDAFVLKLRQNNGYIWRGKGASQEEEKGAEYVASVLKCKTTRIQEGEEPEEFWNSLGGKKDYQTSPLLETQAEDHPPRLYACSNKTGRFFVEEVPGEFTQDDLAEDDVMLLDAWEQIGHE*