Part of scaffold_1113 (Scaffold)

For more information consult the page for scaffold_1113 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HMGCS2 ENSTTRG00000009693 (Bottlenosed dolphin)

Gene Details

3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009184, Bottlenosed dolphin)

Protein Percentage 79.0%
cDNA percentage 85.33%
Ka/Ks Ratio 0.62006 (Ka = 0.1452, Ks = 0.2342)

HMGCS2 ENSBTAG00000003898 (Cow)

Gene Details

Hydroxymethylglutaryl-CoA synthase, mitochondrial

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005088, Cow)

Protein Percentage 68.17%
cDNA percentage 77.13%
Ka/Ks Ratio 0.52214 (Ka = 0.2334, Ks = 0.447)

HMGCS2  (Minke Whale)

Gene Details

3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)

External Links

Gene match (Identifier: BACU002659, Minke Whale)

Protein Percentage 77.89%
cDNA percentage 85.59%
Ka/Ks Ratio 0.88537 (Ka = 0.1561, Ks = 0.1763)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1491 bp    Location:332635..345744   Strand:+
>bmy_15108
ATGAGAATGAGAGAAAACCCAGCCAAGCACAGGACTAAGCTCTGGGTAGCCATTAGCTCTAGGTTTTCTACAGTCCCCGCTATCCCCTTGRCCAAAAGAGATACTTGGCCAAAGGATGTGGGCATCCTTGCCCTGGAGGTCTCTTTCCCAGCCCAATATGTGGACCAAACAGACTTGGAGAAGTTTAACGATGTGGAGGCAGGGAAGTACACAGTGGGCATGAGCCAAACCCAGATGGGCTTCTGCTCAGTCCAGGAGGACATCAACTCCCTGCACCTGACGGTGGTGCAGCAGTTGATGGAGTGCACGCAGCTCCCATGGGAATCTGTGGGCCGGCTGGAAGTGGGCACTGAGACCATCATCGACAAGTCCAAGGCTGTCAAAACAGTGTTCATGGAGCTCTTCCAGGATTCAGGCAACACTGACATTGAGGGCATAGATACCACCAGTGCCTGCTACGGTGACACTGCCTCTCTCTATTCAGTGTTGGCAACTGGGTGCAGTCCAGCTCCTGGGATGGTACACATCGCAGTGCACTCCAGTGGTAATATTCACCCCACAGGCAGGGCTGGAGCTGTGGCAATGCTGGTTGGGCCCAAGGCCCCTCTGGCCCTCGACAGAGGGCTTAGAGCAACCCACATGGAGAATGTATATGACTTCTACAAAGCAGATATGACTTCAGAGTGCCCACAATTGGATGGGAAGCTCTCCATCCAGCGCTACTTACGGGCCCTGGATCGATGCTACGTGTTATACTGTCAAAAGATCCGGAACCAGTGGGAGCAAGCTGGCATCGATAGACATTTCACTCTTGATGATTTACAGTTTATGATCTTTCACACACCCTTCTGCAAGATGGTCCAGAAATCCCTGGCTCACCTGATGTTCAATGACTTTCTGTTAGCCAGTGGCAACACACAGACCGGCCTCAATAAGAGGCTGGAAGCCTTCAGTCTTCTCTCCAGTAGCTGTTACACTTTTCCCCTTGCTGCATTCCTTCCCTCGTGTGGCTTCTCRCCTGGCCTGTTCCTCTGGCTGCCTCACAGGGGGCTAAAGCTGGAAGATACCTACACCAATAAGGACGTAGAAAAAGCATTTCAAAAGGCCTYTCTAGACATGTTCAACAAGAAAAGCAAGGCCTCCCTCTACCTCTCCACACACAGGGGAATATGTACACTTCATCCCTGGATGGATGCCTGGCCTCACTTCTGTCCCCGACTTGGCTGGCTCCAGGATTGGTGCCTTCTCTTATGGCTCTGGCTTAGCGGAAAGTTTCTTTTCATTTCGGGTGTCCCAGGATGCTTCTCCAGGCTCCCCCTACCCCTGGAGAAGCTGGTATCCAGTACATCAGACCTGCCAAAATGTCTCACCTCCTGGAAGCGTATGTCTCCTGAGAAGTTTACAGAAATAATGGACCAAAGAGAACAATTCTACCACAAGGTGAATTTCTCACCACTTGGTGACCAAAACAGCCTTTTCCCAGGCACTTGA

Related Sequences

bmy_15108T0 Protein

Length: 497 aa      View alignments
>bmy_15108T0
MRMRENPAKHRTKLWVAISSRFSTVPAIPLXKRDTWPKDVGILALEVSFPAQYVDQTDLEKFNDVEAGKYTVGMSQTQMGFCSVQEDINSLHLTVVQQLMECTQLPWESVGRLEVGTETIIDKSKAVKTVFMELFQDSGNTDIEGIDTTSACYGDTASLYSVLATGCSPAPGMVHIAVHSSGNIHPTGRAGAVAMLVGPKAPLALDRGLRATHMENVYDFYKADMTSECPQLDGKLSIQRYLRALDRCYVLYCQKIRNQWEQAGIDRHFTLDDLQFMIFHTPFCKMVQKSLAHLMFNDFLLASGNTQTGLNKRLEAFSLLSSSCYTFPLAAFLPSCGFSPGLFLWLPHRGLKLEDTYTNKDVEKAFQKAXLDMFNKKSKASLYLSTHRGICTLHPWMDAWPHFCPRLGWLQDWCLLLWLWLSGKFLFISGVPGCFSRLPLPLEKLVSSTSDLPKCLTSWKRMSPEKFTEIMDQREQFYHKVNFSPLGDQNSLFPGT*