Part of scaffold_1134 (Scaffold)

For more information consult the page for scaffold_1134 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCDC50 ENSTTRG00000008527 (Bottlenosed dolphin)

Gene Details

coiled-coil domain containing 50

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008084, Bottlenosed dolphin)

Protein Percentage 92.0%
cDNA percentage 94.33%
Ka/Ks Ratio 0.68147 (Ka = 0.0542, Ks = 0.0795)

BT.43337 ENSBTAG00000006945 (Cow)

Gene Details

coiled-coil domain-containing protein 50

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009121, Cow)

Protein Percentage 88.78%
cDNA percentage 90.43%
Ka/Ks Ratio 0.32445 (Ka = 0.0715, Ks = 0.2205)

CCDC50  (Minke Whale)

Gene Details

coiled-coil domain containing 50

External Links

Gene match (Identifier: BACU016509, Minke Whale)

Protein Percentage 89.91%
cDNA percentage 91.8%
Ka/Ks Ratio 0.66897 (Ka = 0.0784, Ks = 0.1172)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 954 bp    Location:294157..255704   Strand:-
>bmy_15172
ATGAGCCTTCCTGTCTGCCCTCCTCCCTCATCCTCTGCAGTGTGCCGAGATTTTGCTGTCCTGGAGGACCACACCCTGGCCCACAGCCTGCAGGAACAAGAGATTGAGCATCATTTGGCGTCGAACGTTCAGCGGAACCGTTTGGTCCAGCATGATCTCCAGGTGGCTAAGCAGCTTCAAGAGGAAGATCTGAAAGCTCAGGCTCAGCTGCAGAAGCGCTACAAAGACCTTGAACAACAAGACTGTGAAATTGCTCAGGAGATTCAGGAGAAGCTGGCTATTGAGGCCGAGAGACGACGCATTCAAGAGAAGAAGGATGAGGACATAGCTCGACTCTTGCAAGAAAAAGAGTTACAGGAAGAGAAAAAGCGAAAAAAACACTTTCCAGAGTCCCCTGGAGCCAATGCTTATGGTGATAGTTACTATTATGAAGATGGAGGAACGAAGCCCAGAGTGATGAAAGAAGCGGTCTCTACTCCATCACGAGTGGCCAACAGGGATCAGGAATGGTATGATGCTGAAATTGCCAGAAAACTGCAAGAAGAAGAAATTTTGGCTACCCAGGTGGACACGAGAGCAGCTCAGGTAGCTCAGGATGAGGAAATCGCTAGACTTCTAATGGCTGAAGAAAAGAAAGCTTACAAGAAAGCCAGGGAACGGGAGAARTCATCTTTGGATAAAAGAAAGCATGACCCCGAGTGGAAGCCCAAGACAGCGAAATCAGCACACTCAAAGTCAAAAGAGAGTGATGAACCTCACCATTCTAAGAATGACAGGCCAGCACGGCCACTACCACCTACCATGACAGAGGCTGAGGATTTGGATTACACTCATTTTACAAACCAGCATAATTCCACACGTCATTTCTCAAAGTCAGAGTCTTCTCATAAAGGTGAGCCCCGGACATCCTCATCATCAGAAGCTTTGGACGTCCTCACACCAAGCTGTGAGTGA

Related Sequences

bmy_15172T0 Protein

Length: 318 aa      View alignments
>bmy_15172T0
MSLPVCPPPSSSAVCRDFAVLEDHTLAHSLQEQEIEHHLASNVQRNRLVQHDLQVAKQLQEEDLKAQAQLQKRYKDLEQQDCEIAQEIQEKLAIEAERRRIQEKKDEDIARLLQEKELQEEKKRKKHFPESPGANAYGDSYYYEDGGTKPRVMKEAVSTPSRVANRDQEWYDAEIARKLQEEEILATQVDTRAAQVAQDEEIARLLMAEEKKAYKKAREREKSSLDKRKHDPEWKPKTAKSAHSKSKESDEPHHSKNDRPARPLPPTMTEAEDLDYTHFTNQHNSTRHFSKSESSHKGEPRTSSSSEALDVLTPSCE*