Part of scaffold_1144 (Scaffold)

For more information consult the page for scaffold_1144 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SPATA18 ENSTTRG00000002173 (Bottlenosed dolphin)

Gene Details

spermatogenesis associated 18

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002040, Bottlenosed dolphin)

Protein Percentage 91.47%
cDNA percentage 95.1%
Ka/Ks Ratio 0.84761 (Ka = 0.0485, Ks = 0.0572)

BT.51755 ENSBTAG00000018106 (Cow)

Gene Details

Mitochondria-eating protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000024097, Cow)

Protein Percentage 86.32%
cDNA percentage 90.88%
Ka/Ks Ratio 0.5035 (Ka = 0.0787, Ks = 0.1564)

SPATA18  (Minke Whale)

Gene Details

spermatogenesis associated 18

External Links

Gene match (Identifier: BACU008758, Minke Whale)

Protein Percentage 93.86%
cDNA percentage 95.41%
Ka/Ks Ratio 0.59005 (Ka = 0.0406, Ks = 0.0687)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1497 bp    Location:75981..111351   Strand:+
>bmy_15309
ATGGCGGATAACCTGAGGAAACTGGTCTCCAACGAATCTTTAAGATCGATGCACGACCAGCTGGAGTCCTGGCTGAGGGAGTACAACAATAAGGAAATTGCACTGATGTCTACTGTTCTGGCGTTGCAGACGAACTCATGTGATCAAAATCTAAATCATTGCCTCGAACTCATTGAACAAGTCGCCGAAGTGCAGAGACAACTCTTTGGGATCTTCACTACAGCAGCCCAAGAAGTTACTGATTTCTCTTACAGTATGGCTGAAACTGAAAAGACTCTTCAAGAAACCAAGAACAGATCGGCCATATCCCTTCTGACTGCAGAGGAGGAAATAAATCAGCTAAGAAAGCAGCTTAAATCTCTTCAAGCCCAGGAGGAATCTCGCCACAGACACTCAGAGCATGGGAGCTCAGAGAAGCGGGGCTCCGAGCGTAGGAGAGAGGAGCTGCGGGGCTCGGAGCAGATGGGCGCGGACGGGTGGAGCGTAGACCAGCGGAAGGCAGAAGCGATATGCGATTATGAGAAACAGCTCCGAACGCTGAAGGACGAGATAGCTGTTCTGTCCGCTGAAAAATCTGTACTCCAAGGAAGGTCCGCCAGGAGCCGGTCTCCGAGCCCTGACCCTCGCAGCCACGGCCGCAGCCGCAGTCACGGCCGCAGCCGCAGCCGGTCCACCAGCCCCAACACCGCGGTCGCGAAGGTCAGGAGCCCGTCTCCGAGTCGCGCCAAACTGTCCAGCGTGGCGCGCAAGGCCGCCCTGCTGTCCCGGTTCAGCGACGCCTATTCCCAGACCCGCCTGGATGCGCAGTGCCTGCTGCGGCGCTGCATCGACAAAGCCGAGACGGTGCAGCGGATCATCTACATCGCGGCAGTGATAAATTTGCTGTACTTTTATGTGCAGGAGGCRTTCCATGTAGCTAAAGTGGCATTCAGACACTTCAAGATCCGTGTGAGGAAATCGCTGACACCGTCTTATGCAGGGTCAAATGACTTTGAGGATGCTGTCTTGGATTATATCATTTGTCATCTTGATCTATATGATTCCCAAAGCAGTGTTAATGATGTGATCCGAGCCATGAATGTCAATCCCAAGATTTCATTCCCTCCTGAAGTTGACTTTTGCCTCCTCAGTAACTTCATCCATGAGATATGTTGCATCGCCTTTGCAATGCAGACTTTAGACCCACCCCTCGATATTGCATTTGGGGCTGATGGAGAAATTTTTAATGATTGCAAGTACCGTCGAAGCTATGACTCCGATTTCACGGCTCCCTTGGTCTTCTATCACGTGTGGCCTGCTATCATGGAGAATGACTGTATCATTATGAAGGGAGAAGCTGTCACCAGGAGAGGGGCTTTTTGGAACTCAGTGCGATCTCTAAGTCGATGTCGAAGCAGGAGTTTAAGTCCCATCTGCCCTCGTAGCCGTATTAGTTTAAGCACGATATCTCGAAGCCGGAGTCCTTCTCCAATAAGATATGGATTGCCAAGGTTTTAA

Related Sequences

bmy_15309T0 Protein

Length: 499 aa      View alignments
>bmy_15309T0
MADNLRKLVSNESLRSMHDQLESWLREYNNKEIALMSTVLALQTNSCDQNLNHCLELIEQVAEVQRQLFGIFTTAAQEVTDFSYSMAETEKTLQETKNRSAISLLTAEEEINQLRKQLKSLQAQEESRHRHSEHGSSEKRGSERRREELRGSEQMGADGWSVDQRKAEAICDYEKQLRTLKDEIAVLSAEKSVLQGRSARSRSPSPDPRSHGRSRSHGRSRSRSTSPNTAVAKVRSPSPSRAKLSSVARKAALLSRFSDAYSQTRLDAQCLLRRCIDKAETVQRIIYIAAVINLLYFYVQEAFHVAKVAFRHFKIRVRKSLTPSYAGSNDFEDAVLDYIICHLDLYDSQSSVNDVIRAMNVNPKISFPPEVDFCLLSNFIHEICCIAFAMQTLDPPLDIAFGADGEIFNDCKYRRSYDSDFTAPLVFYHVWPAIMENDCIIMKGEAVTRRGAFWNSVRSLSRCRSRSLSPICPRSRISLSTISRSRSPSPIRYGLPRF*