Part of scaffold_1145 (Scaffold)

For more information consult the page for scaffold_1145 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TSEN54 ENSTTRG00000015828 (Bottlenosed dolphin)

Gene Details

tRNA splicing endonuclease 54 homolog (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015002, Bottlenosed dolphin)

Protein Percentage 92.2%
cDNA percentage 93.83%
Ka/Ks Ratio 0.39186 (Ka = 0.0499, Ks = 0.1273)

TSEN54 ENSBTAG00000000824 (Cow)

Gene Details

tRNA-splicing endonuclease subunit Sen54

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001090, Cow)

Protein Percentage 83.82%
cDNA percentage 87.19%
Ka/Ks Ratio 0.24455 (Ka = 0.0917, Ks = 0.3749)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1041 bp    Location:542158..549763   Strand:+
>bmy_15341
ATGTGTGGGTCGCGTGCACCTCAGCAGTCAGGAGCAGATGTGCTGCATTTCCTCCCCACGTCCCTCAGGTCCATTAATAAGAAGCCCAAGGTCCTGGAGAACCCCCTGCAGGGGGTGGATGGGACACCCGAGAGCCTGGCAACCTCCAGCCCACCTCCCCGAAACCAGAACAGCCGATGTCCAGAGGAGAAATCCCAGGAGTCAAGCCCCGTAAAGGGCCCCGTGGGCCCCTTTCAGCTTCTGGGGTCCCTGGAGCCCTGCCCTCGGCTGGCCAGGGAGGGGGTGCGGTGCAGCCAGGAGAGTGGCAAAATGGAGAACGGGGTCAAGGGGGCTTGCAAGCCACGCTGGAACTTTGAGCAGATCTCCTTCCCCAACATGGCTTCAGATAGTCGCCATACCCTCCTGCTTGCCCCCGCCCCAGAGCTGCTCCCGGCCAACGTGGCAGGGCGGGAGACAGATGCTGAGTCCTGGTGCCAGAAGCTAAACCAGCGGAAGGAGAAGCTCTCCAGGCGGGAACGGGAGCAACAGGCAGAGGCCCAGCACTTCCGGGAGGATGTAAACTCGGATCCCGAGGTGCAGCGCTGCTCCAGCTGGCAGGAGTACAAGCAGCTGCTGCAGAGGCGGCACCTGCAGAAGACCCAGAGCCGCCCCGCACACCTGTGGGACCAGCCTGTCACGCCCTTGCTGAGTCCCGGTCAGGCAGACTCCCCAGCCACAGTCCTTCAGCATATCTCTGTGCTGCAGACGACACACCTTGCTGATGGAGGTGCGCGGCTGGTGGAGAAGTCTGCGGGCTTGGAGATCAGCTTTGATGTTTACCAGGCCGACGCCGTGGCCACCTTCCGAAAGAATAACCCTGGCAAGCCCTATGTCCGGATGTGCATTAGTGGATTTGATGAGCCAGTCCCAGACCTCTGCACCCTCAAGCGGTTGTCCTACCAGAGCGGGGATGTTCCTCTGATCTTTGCCCTGGTGGATCACGGAGACATCTCCTTCTACAGCTTCAGGGACTTCACGCTACCCAGGGATCTGGAGCACTGA

Related Sequences

bmy_15341T0 Protein

Length: 347 aa      View alignments
>bmy_15341T0
MCGSRAPQQSGADVLHFLPTSLRSINKKPKVLENPLQGVDGTPESLATSSPPPRNQNSRCPEEKSQESSPVKGPVGPFQLLGSLEPCPRLAREGVRCSQESGKMENGVKGACKPRWNFEQISFPNMASDSRHTLLLAPAPELLPANVAGRETDAESWCQKLNQRKEKLSRREREQQAEAQHFREDVNSDPEVQRCSSWQEYKQLLQRRHLQKTQSRPAHLWDQPVTPLLSPGQADSPATVLQHISVLQTTHLADGGARLVEKSAGLEISFDVYQADAVATFRKNNPGKPYVRMCISGFDEPVPDLCTLKRLSYQSGDVPLIFALVDHGDISFYSFRDFTLPRDLEH*