Part of scaffold_1136 (Scaffold)

For more information consult the page for scaffold_1136 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PIF1 ENSTTRG00000011849 (Bottlenosed dolphin)

Gene Details

PIF1 5'-to-3' DNA helicase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011241, Bottlenosed dolphin)

Protein Percentage 90.61%
cDNA percentage 91.13%
Ka/Ks Ratio 0.40282 (Ka = 0.0479, Ks = 0.1189)

PIF1 ENSBTAG00000007638 (Cow)

Gene Details

ATP-dependent DNA helicase PIF1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010047, Cow)

Protein Percentage 88.61%
cDNA percentage 89.55%
Ka/Ks Ratio 0.2534 (Ka = 0.07, Ks = 0.2764)

PIF1  (Minke Whale)

Gene Details

PIF1 5'-to-3' DNA helicase

External Links

Gene match (Identifier: BACU001057, Minke Whale)

Protein Percentage 91.3%
cDNA percentage 92.84%
Ka/Ks Ratio 0.56719 (Ka = 0.0649, Ks = 0.1145)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2004 bp    Location:526813..520312   Strand:-
>bmy_15375
ATGCTGTCGGGCACCGAGGCAGCGGCAGCGGAATGCGCGGACGCGGAGCTGCGGTGCCGTGTTGCTGTGGAGGAGTTGAGCCCGGGCGGGCAGCCGCGAAGGCGCCAGGCCTTACGCACCGCGGAGCTGAGACTGGGTCGTAACGAGCGCCGCGAGTTGATGCTGAGGCTGCAGGCGCCCGGGCCCGCGGGGCGGCCGCGGTGCTTTCCCCTGCGCGCCGCGCGCCTCTTCACGCGCTTCGCCGCGTCCGGGCGCAGCACTCTTCGGCTTCCAGCTGACGGCGCTCCCCGGACCGGCGCCGTGCAGCTGCTGCTCTCCGACTGCCCCCCTGACCGCCTGCGCCGCTTCCTGCGCACTCTGCGCCTCAAGCTGGCCGCGGCCCCGGGTCCCGGGCCGGCCTCCGCCCGCACGCAGCTGCTTGGCCCGCGGCCCCGCGACTTCGTCACCATCAGCCCGGTGCAGCCCGAGGAGCTGCGGCGCGCGGCGGCCACTTGTGTCACGCACTCCACGCCGGTGAAGCAGCCCACGGAGCCCCGGTCGGGGGCCAAGCCCAGCACCGAAGTCCGAAGGTGGCCCCTGCCTGTGAAGAAGCTGAGCTTGCCCCCCACCAAACCAGAGCTTTCCAGGGAACAGGCTGCTGTGCTGAGGGTTGTCCTGAAAGGCCAGAGCATTTTCTTCACTGGGAGTGCAGGGACGGGGAAATCTTATCTGCTGAAGCGTATCCTGGGCTCACTGCCTCCCACAGGCACTGTGGCCACTGCCAGCACTGGGGTGGCAGCCTGCCACATCGGGGGTACTACCCTCCATGCCTTTGCAGGCATTGGCTCGGGCCAGGCTCCCCTGGCCCAGTGTGTGGCCCTGGCCCAGCGGCCAGGTGTGCGGCAGGGCTGGCTGAACTGCCAGCGGCTAGTCATTGATGAGATCTCCATGGTGGAAGCGGACCTATTTGACAAGCTGGAGGCCGTGGCCAGGTCAGTATGGGCAGTGAGGACTGGGTTCTGGTGGTCTTCCATGTGGAACTCGCTCACCCCGGTGCCTAAAGCACCCCATGCTCCTCTCCAGAGCTGTCCGGCAGCAGAACAAGCCATTCGGAGGGATCCAGCTTATCATCTGTGGGGACTTCCTGCAGCTGCCGCCTGTAACCAAGGGATCCCAGCCCCCGCAGCCAAGAGCTGGAGGAGATGTGTCCCAGTGACCCTGGAGCTGACAGAGGTGTGGAGGCAGACGGACGAGACCTTCATCTCTCTGCTGCAAGCTGTGCGGCTGGGCAGGTGCTCAGATGAGGTCACCCGCCAGCTCCGGGCCACGGCTGCCCACAGGGTGGGGCGAGATGGGATTGTGGCCACGAGGCTCTGCACCCACCAGGATGATGTGGCGCTTACCAACGAGAGGCAGCTGCAGAAACTACCAGGTGAGGTACACAGCTTTGAGGCCATGGACAGTGACCCTGAGCAAGCCCGGACCCTGGATGCCCAGTGTCCCGTCAGCCAGCTCCTTCAGCTAAAGCTGGGGGCTCAGGTGATGCTGGTGAAGAACTTGGCAGTGTCTCGGGGCCTGGTAAATGGTGCCCGAGGGGTGGTAGTTGGGTTCGAAGCCGAGGGGAGAGGGCTGCCCCAGGTGCGGTTCCTGTGTGGAGTCACCGAGGTCATCCGTGCTGACCGCTGGATGGTGCAGGCCACTGGGGGCCGGCTTCTCAGCCGGCAGCAGCTGCCCCTCCAGCTGGCCTGGGCCATATCCATCCACAAGAGCCAGGGCATGTCCCTGGATTGCGTGGAGATCTCTCTGGGCCGTGTGTTTGCCAGCGGCCAGGCCTATGTGGCCCTTTCCCGGGCCCGCAGCCTGCAGGGCCTGTGTGTGTTGGACTTTGACCCCATGGTGGTTCGCTGTGACCCCCATGTGCTGAGCTTCTATGCTACCCTGCGGCAGGACAGGGGCCTCAGCCTGGAGTCCCCAGATGACGATGAGGCAGCCTCAGACCAGGAGAACGTGGACCCGAACCTTTGA

Related Sequences

bmy_15375T0 Protein

Length: 668 aa      View alignments
>bmy_15375T0
MLSGTEAAAAECADAELRCRVAVEELSPGGQPRRRQALRTAELRLGRNERRELMLRLQAPGPAGRPRCFPLRAARLFTRFAASGRSTLRLPADGAPRTGAVQLLLSDCPPDRLRRFLRTLRLKLAAAPGPGPASARTQLLGPRPRDFVTISPVQPEELRRAAATCVTHSTPVKQPTEPRSGAKPSTEVRRWPLPVKKLSLPPTKPELSREQAAVLRVVLKGQSIFFTGSAGTGKSYLLKRILGSLPPTGTVATASTGVAACHIGGTTLHAFAGIGSGQAPLAQCVALAQRPGVRQGWLNCQRLVIDEISMVEADLFDKLEAVARSVWAVRTGFWWSSMWNSLTPVPKAPHAPLQSCPAAEQAIRRDPAYHLWGLPAAAACNQGIPAPAAKSWRRCVPVTLELTEVWRQTDETFISLLQAVRLGRCSDEVTRQLRATAAHRVGRDGIVATRLCTHQDDVALTNERQLQKLPGEVHSFEAMDSDPEQARTLDAQCPVSQLLQLKLGAQVMLVKNLAVSRGLVNGARGVVVGFEAEGRGLPQVRFLCGVTEVIRADRWMVQATGGRLLSRQQLPLQLAWAISIHKSQGMSLDCVEISLGRVFASGQAYVALSRARSLQGLCVLDFDPMVVRCDPHVLSFYATLRQDRGLSLESPDDDEAASDQENVDPNL*