Sequence detailsbmy_15375 (Coding sequence)

Part of scaffold_1136 (SequenceType object (1))

For more information consult the page for scaffold_1136 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PIF1ENSTTRG00000011849 (Bottlenosed dolphin)

Gene Details

PIF1 5'-to-3' DNA helicase

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011241, Bottlenosed dolphin)

Protein Percentage 90.61%
cDNA percentage 91.13%
Ka/Ks Ratio 0.40282 (Ka = 0.0479, Ks = 0.1189)

PIF1ENSBTAG00000007638 (Cow)

Gene Details

ATP-dependent DNA helicase PIF1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000010047, Cow)

Protein Percentage 88.61%
cDNA percentage 89.55%
Ka/Ks Ratio 0.2534 (Ka = 0.07, Ks = 0.2764)

PIF1 (Minke Whale)

Gene Details

PIF1 5'-to-3' DNA helicase

External Links

Gene match (Identifier: BACU001057, Minke Whale)

Protein Percentage 91.3%
cDNA percentage 92.84%
Ka/Ks Ratio 0.56719 (Ka = 0.0649, Ks = 0.1145)

Additional orthologs identified in other species via the OPTIC pipeline.

PIF1 (Human)   Pif1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2004 bp    Location:526813..520312   Strand:-
Raw sequence 
>bmy_15375
ATGCTGTCGGGCACCGAGGCAGCGGCAGCGGAATGCGCGGACGCGGAGCTGCGGTGCCGTGTTGCTGTGGAGGAGTTGAGCCCGGGCGGGCAGCCGCGAAGGCGCCAGGCCTTACGCACCGCGGAGCTGAGACTGGGTCGTAACGAGCGCCGCGAGTTGATGCTGAGGCTGCAGGCGCCCGGGCCCGCGGGGCGGCCGCGGTGCTTTCCCCTGCGCGCCGCGCGCCTCTTCACGCGCTTCGCCGCGTCCGGGCGCAGCACTCTTCGGCTTCCAGCTGACGGCGCTCCCCGGACCGGCGCCGTGCAGCTGCTGCTCTCCGACTGCCCCCCTGACCGCCTGCGCCGCTTCCTGCGCACTCTGCGCCTCAAGCTGGCCGCGGCCCCGGGTCCCGGGCCGGCCTCCGCCCGCACGCAGCTGCTTGGCCCGCGGCCCCGCGACTTCGTCACCATCAGCCCGGTGCAGCCCGAGGAGCTGCGGCGCGCGGCGGCCACTTGTGTCACGCACTCCACGCCGGTGAAGCAGCCCACGGAGCCCCGGTCGGGGGCCAAGCCCAGCACCGAAGTCCGAAGGTGGCCCCTGCCTGTGAAGAAGCTGAGCTTGCCCCCCACCAAACCAGAGCTTTCCAGGGAACAGGCTGCTGTGCTGAGGGTTGTCCTGAAAGGCCAGAGCATTTTCTTCACTGGGAGTGCAGGGACGGGGAAATCTTATCTGCTGAAGCGTATCCTGGGCTCACTGCCTCCCACAGGCACTGTGGCCACTGCCAGCACTGGGGTGGCAGCCTGCCACATCGGGGGTACTACCCTCCATGCCTTTGCAGGCATTGGCTCGGGCCAGGCTCCCCTGGCCCAGTGTGTGGCCCTGGCCCAGCGGCCAGGTGTGCGGCAGGGCTGGCTGAACTGCCAGCGGCTAGTCATTGATGAGATCTCCATGGTGGAAGCGGACCTATTTGACAAGCTGGAGGCCGTGGCCAGGTCAGTATGGGCAGTGAGGACTGGGTTCTGGTGGTCTTCCATGTGGAACTCGCTCACCCCGGTGCCTAAAGCACCCCATGCTCCTCTCCAGAGCTGTCCGGCAGCAGAACAAGCCATTCGGAGGGATCCAGCTTATCATCTGTGGGGACTTCCTGCAGCTGCCGCCTGTAACCAAGGGATCCCAGCCCCCGCAGCCAAGAGCTGGAGGAGATGTGTCCCAGTGACCCTGGAGCTGACAGAGGTGTGGAGGCAGACGGACGAGACCTTCATCTCTCTGCTGCAAGCTGTGCGGCTGGGCAGGTGCTCAGATGAGGTCACCCGCCAGCTCCGGGCCACGGCTGCCCACAGGGTGGGGCGAGATGGGATTGTGGCCACGAGGCTCTGCACCCACCAGGATGATGTGGCGCTTACCAACGAGAGGCAGCTGCAGAAACTACCAGGTGAGGTACACAGCTTTGAGGCCATGGACAGTGACCCTGAGCAAGCCCGGACCCTGGATGCCCAGTGTCCCGTCAGCCAGCTCCTTCAGCTAAAGCTGGGGGCTCAGGTGATGCTGGTGAAGAACTTGGCAGTGTCTCGGGGCCTGGTAAATGGTGCCCGAGGGGTGGTAGTTGGGTTCGAAGCCGAGGGGAGAGGGCTGCCCCAGGTGCGGTTCCTGTGTGGAGTCACCGAGGTCATCCGTGCTGACCGCTGGATGGTGCAGGCCACTGGGGGCCGGCTTCTCAGCCGGCAGCAGCTGCCCCTCCAGCTGGCCTGGGCCATATCCATCCACAAGAGCCAGGGCATGTCCCTGGATTGCGTGGAGATCTCTCTGGGCCGTGTGTTTGCCAGCGGCCAGGCCTATGTGGCCCTTTCCCGGGCCCGCAGCCTGCAGGGCCTGTGTGTGTTGGACTTTGACCCCATGGTGGTTCGCTGTGACCCCCATGTGCTGAGCTTCTATGCTACCCTGCGGCAGGACAGGGGCCTCAGCCTGGAGTCCCCAGATGACGATGAGGCAGCCTCAGACCAGGAGAACGTGGACCCGAACCTTTGA

Related Sequences

bmy_15375T0 SequenceType object (3)

Length: 668 aa      View alignments
>bmy_15375T0
MLSGTEAAAAECADAELRCRVAVEELSPGGQPRRRQALRTAELRLGRNERRELMLRLQAPGPAGRPRCFPLRAARLFTRFAASGRSTLRLPADGAPRTGAVQLLLSDCPPDRLRRFLRTLRLKLAAAPGPGPASARTQLLGPRPRDFVTISPVQPEELRRAAATCVTHSTPVKQPTEPRSGAKPSTEVRRWPLPVKKLSLPPTKPELSREQAAVLRVVLKGQSIFFTGSAGTGKSYLLKRILGSLPPTGTVATASTGVAACHIGGTTLHAFAGIGSGQAPLAQCVALAQRPGVRQGWLNCQRLVIDEISMVEADLFDKLEAVARSVWAVRTGFWWSSMWNSLTPVPKAPHAPLQSCPAAEQAIRRDPAYHLWGLPAAAACNQGIPAPAAKSWRRCVPVTLELTEVWRQTDETFISLLQAVRLGRCSDEVTRQLRATAAHRVGRDGIVATRLCTHQDDVALTNERQLQKLPGEVHSFEAMDSDPEQARTLDAQCPVSQLLQLKLGAQVMLVKNLAVSRGLVNGARGVVVGFEAEGRGLPQVRFLCGVTEVIRADRWMVQATGGRLLSRQQLPLQLAWAISIHKSQGMSLDCVEISLGRVFASGQAYVALSRARSLQGLCVLDFDPMVVRCDPHVLSFYATLRQDRGLSLESPDDDEAASDQENVDPNL*