Part of scaffold_1154 (Scaffold)

For more information consult the page for scaffold_1154 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCBE1 ENSTTRG00000000125 (Bottlenosed dolphin)

Gene Details

collagen and calcium binding EGF domains 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000117, Bottlenosed dolphin)

Protein Percentage 95.92%
cDNA percentage 94.98%
Ka/Ks Ratio 0.19034 (Ka = 0.0257, Ks = 0.1353)

CCBE1 ENSBTAG00000008723 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011491, Cow)

Protein Percentage 88.96%
cDNA percentage 88.85%
Ka/Ks Ratio 0.19252 (Ka = 0.0641, Ks = 0.3327)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1176 bp    Location:558031..512891   Strand:-
>bmy_15393
ATGTTACAGGAAGGAATGAGGAGGAAGTGCTGCAAAGGGTATAAATTTGTCCTTGGACAATGCATCCCAGAAGATTATGATGTATGTGCTGAGGCTCCCTGTGAACAGCAGTGCACAGATAACTTCGGCCGAGTGCTGTGTACKTGTTACCCAGGATACCGATATGACCGGGAGAGGCACCGGAGGCGGGAGAAGCCGTACTGTCTGGATATCGACGAGTGTGCCACCAGCAACGAAACGCTGTGTGCACACATCTGCATCAACACCTTGGGCAGCTACCGCTGTGAGTGCCGGGAGGGCTACATCCAGGAGGACGACGGGAGGACGTGCACCAAGGGGGACAAATACCCCAACGACACTGGGCACGATGAGAAGGCAGAGAACGCGGTGAGAGCCGGCACCTGCTGCGCCACGTGCAAGGAGTTTCACCAGATGAAGCAGACGGTCCTGCAGCTGAAGCAGAAGATTGCCCTGCTCCCCAACAGCGCTGCGGACCTGGGCAAGTACATCACTGGCTCACCAGGACCAAAGGGGAGCCCAGGCTTCCCGGGTATTCCAGGCCCCCCCGGGCAGCCCGGCCCGCGGGGCTCAATGGGACCCATGGGACCGTCTCCTGATCTGTCCCACATTAAGCAAGGCCGGAGGGGCCCTGTGGGTCCACCAGGTGCCCCAGGAAGAGATGGTTCTAAGGGGGAAAGAGGAGCGCCTGGCCCCCGAGGGTCTCCAGTAAGTAGCACCGCCTGTCCTACTTCCCCAGTGCAATGTGCTCAGGGCTGCAGCTCTGATGCGCCTGTAAGTTGGTCTTACGGGCAACAGTCAGCCCCTTCCAGCTGTCACTCAGCTTGCCCACAGAGAACTCCGTGGTTAGAAGAAGAATCACAGAAGCCTTTAGCAGCTGCTAATCTTTACTTGGAATGTCTTCTCTTAAGATTCAAAACCCCAGGACCCCCTGGTTCCTTTGACTTCCTGCTGCTCATGCTGGCGGACATCCGCAACGACATCGCCGAGCTGCAGGAAAAGGTGTTCGGGCACCGGACTCACTCTTCAGCAGAGGAGTTCCCGTTACCTCAGGAATTTTCCAGCTCTCCAGAGACCATGGACTTCGGCTCTGGAGATGACAACCCCAAAAGAACCGAGACCAGAGACTTGGGAACCCACAGAGACTTCTACCCTTAG

Related Sequences

bmy_15393T0 Protein

Length: 392 aa      View alignments
>bmy_15393T0
MLQEGMRRKCCKGYKFVLGQCIPEDYDVCAEAPCEQQCTDNFGRVLCTCYPGYRYDRERHRRREKPYCLDIDECATSNETLCAHICINTLGSYRCECREGYIQEDDGRTCTKGDKYPNDTGHDEKAENAVRAGTCCATCKEFHQMKQTVLQLKQKIALLPNSAADLGKYITGSPGPKGSPGFPGIPGPPGQPGPRGSMGPMGPSPDLSHIKQGRRGPVGPPGAPGRDGSKGERGAPGPRGSPVSSTACPTSPVQCAQGCSSDAPVSWSYGQQSAPSSCHSACPQRTPWLEEESQKPLAAANLYLECLLLRFKTPGPPGSFDFLLLMLADIRNDIAELQEKVFGHRTHSSAEEFPLPQEFSSSPETMDFGSGDDNPKRTETRDLGTHRDFYP*