Part of scaffold_1165 (Scaffold)

For more information consult the page for scaffold_1165 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LHCGR ENSTTRG00000003458 (Bottlenosed dolphin)

Gene Details

Luteinizing hormone/choriogonadotropin receptor

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003243, Bottlenosed dolphin)

Protein Percentage 84.4%
cDNA percentage 87.52%
Ka/Ks Ratio 0.5762 (Ka = 0.098, Ks = 0.1701)

LHCGR ENSBTAG00000016573 (Cow)

Gene Details

Lutropin-choriogonadotropic hormone receptor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022047, Cow)

Protein Percentage 85.0%
cDNA percentage 86.61%
Ka/Ks Ratio 0.38235 (Ka = 0.1093, Ks = 0.2859)

LHCGR  (Minke Whale)

Gene Details

luteinizing hormone/choriogonadotropin receptor

External Links

Gene match (Identifier: BACU013880, Minke Whale)

Protein Percentage 85.9%
cDNA percentage 89.57%
Ka/Ks Ratio 0.62329 (Ka = 0.1004, Ks = 0.161)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1863 bp    Location:119934..93925   Strand:-
>bmy_15476
ATGTGTGAAGCTGTAAACTCAGAAGAATTCCAGAAGAAAGCCCACGAGAGCAGGGGAAGCCAGACAAGGCTCTTCCTCCCGTGGAAGGGCAAGGCCACTGCTCCACCCAGCCTGTTGACTGAACTCGTGTTAGTGTTCAAGTGTCAAGCTTCAACACTGAGTCCCAGCTATACTTATTTATATGCTGCAATTGACTCTGACAACCTCGTCTCTTTGAAAGTGGAAATACACCCAGGGGATGGGACGATGGAGCTAAAGGAAAACGCGTACCTGGAGAAGATACACAATGGCGCCTTCCGGGGGGCCACAGGGCCTAGCATCTTGGATATTTCTTCCACTAAACTGCAGGCCCTGCCTAGCTATGGGCTGGAGTCCATTCAGACACTAATTGCCACATCATCCTATTCTCTGAAAAAACTGCCATCAAGAGAAAAATTTACCAGTCTCCTGGATGCCACATTGACTTACCCCAGCCACTGCTGTGCTTTTAGAAACTTGCCAACAAAAGAGCAGAATTTTTCATTTTCCATTTTTAAAAACTTTTCCAAACAATGTGAAAGCACAGCAAGGAGACCAAATAATGAAACACTGTATTTTGATGTCACTAAGGGCTTGTTCAATGATAGCCTCATTTCTGCTTTGGCATTTCACATACCTTCAAATGTAATTGTATTGCTCAAATATATCATTTTATCCACTCACTGTATTAGTTATTCTGCCATCTTTGCTGAGAGTGAACTGAGTGGCTGGGATTATGACTATGGTTTCTGCTTACCCAAGACACTCCAATGTGCTCCTGAACCAGATGCTTTTAATCCCTGTGAAGATATTATGGGCTATGACTTCCTTAGAGTACTGATTTGGCTGATTAATATTTTAGCCATCACGGGAAATGTGACTGTCCTCTTTGTTCTCCTGACCAGTCGTTATAAACTGACAGTGCCCCGCTTTCTCATGTGCAACCTCTCCTTTGCAGACTTCTGCATGGGGCTCTACCTGCTACTCATTGCCTCAGTTGATGCCCAAACCAAAGGCCAGTATTATAACCATGCCATAGATTGGCAGACAGGGAGTGGATGTAGCGCTGCTGGCTTCTTCACTGTATTTGCAAGTGAACTTTCTGTCTACACCCTCACAGTCATCACACTAGAAAGATGGCACACCATCACCTATGCTATTCAGCTGGACCAAAAGCTGCGATTAAAACATGCCATTCCGATTATGCTTGGAGGATGGCTCTTTTCTACTCTAATCGCCATGTTGCCTCTTGTGGGTGTCAGCAATTACATGAAGGTCAGCATTTGCCTCCCCATGGATGTGGAAACCACTCTCTCACAGGTCTACATATTAACCATCCTGATGCTCAATGTAGTGGCCTTCATCATCATTTGTGCTTGCTACATTAAAATTTATTTTGCAGTTCAAAATCCAGAGCTGATGGCTACTAACAAAGATACAAAGATTGCTAAGAAAATGGCAGTCCTCATCTTCACCGATTTCACCTGCATGGCACCAATCTCTTTCTTTGCCATCTCAGCTGCCTTCAAAGTGCCCCTTATTACAGTAACCAATTCTAAGGTTTTACTGGTTCTTTTTTATCCTGTCAATTCGTGTGCCAATCCGTTTCTGTATGCAATTTTCACAAAGGCATTCCGAAGGGATTTCTTTCTGTTGCTGAGCAAATTTGGCTGCTGTAAATATCGAGCTGAACTTTATAGGAGGAAGGATTTTTCAGCTTATACCTCCAACTGCAAAAATGGCTTCACTGGATCAAATAAGCCTTCCCAGTCTACCTTGAAGGTGACCACATTACAATGTCAATATTCAGCTGTCCTGGACAAGACTTGCTGTAAGGAGTGTTAA

Related Sequences

bmy_15476T0 Protein

Length: 621 aa      View alignments
>bmy_15476T0
MCEAVNSEEFQKKAHESRGSQTRLFLPWKGKATAPPSLLTELVLVFKCQASTLSPSYTYLYAAIDSDNLVSLKVEIHPGDGTMELKENAYLEKIHNGAFRGATGPSILDISSTKLQALPSYGLESIQTLIATSSYSLKKLPSREKFTSLLDATLTYPSHCCAFRNLPTKEQNFSFSIFKNFSKQCESTARRPNNETLYFDVTKGLFNDSLISALAFHIPSNVIVLLKYIILSTHCISYSAIFAESELSGWDYDYGFCLPKTLQCAPEPDAFNPCEDIMGYDFLRVLIWLINILAITGNVTVLFVLLTSRYKLTVPRFLMCNLSFADFCMGLYLLLIASVDAQTKGQYYNHAIDWQTGSGCSAAGFFTVFASELSVYTLTVITLERWHTITYAIQLDQKLRLKHAIPIMLGGWLFSTLIAMLPLVGVSNYMKVSICLPMDVETTLSQVYILTILMLNVVAFIIICACYIKIYFAVQNPELMATNKDTKIAKKMAVLIFTDFTCMAPISFFAISAAFKVPLITVTNSKVLLVLFYPVNSCANPFLYAIFTKAFRRDFFLLLSKFGCCKYRAELYRRKDFSAYTSNCKNGFTGSNKPSQSTLKVTTLQCQYSAVLDKTCCKEC*