Part of scaffold_1163 (Scaffold)

For more information consult the page for scaffold_1163 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DCDC1 ENSTTRG00000002149 (Bottlenosed dolphin)

Gene Details

doublecortin domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002018, Bottlenosed dolphin)

Protein Percentage 86.87%
cDNA percentage 91.58%
Ka/Ks Ratio 0.70806 (Ka = 0.0834, Ks = 0.1178)

BT.56234 ENSBTAG00000000954 (Cow)

Gene Details

doublecortin domain-containing protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001262, Cow)

Protein Percentage 88.42%
cDNA percentage 92.02%
Ka/Ks Ratio 0.41604 (Ka = 0.0645, Ks = 0.155)

DCDC1  (Minke Whale)

Gene Details

doublecortin domain containing 1

External Links

Gene match (Identifier: BACU008870, Minke Whale)

Protein Percentage 89.04%
cDNA percentage 91.55%
Ka/Ks Ratio 0.57936 (Ka = 0.0788, Ks = 0.136)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1863 bp    Location:606226..628917   Strand:+
>bmy_15484
ATGTCATCCCAGGCAAAAGCAGTTATTAAACCTACTGAAGATTATTTGCAGCCTCAGTTTGGCCCCAACAGACTTTTACATTCAGCGGCAGCATCAGAAGGGTCAGGTCTTCAAGATTGCTCCACACATCAAACAGCATCAGATCATAGCCATGATGAAATATCAGACCCAGATAGCTACAAATCAAACAGTAAAAACAATTCTTTTTTTATATCAGCATCCAAGAGAAACAGACCTGTCAGTGCTCCAGTGGGTCAATTGAGAGTTGCAGAGTTCTCTTCTTTAAAATTTAAGTTGGACCAGGATTGGCATAGATTGTCTCAAAGATACAAACTTCAACCCAGAGTGATTAGAGTAACAGCTTACAAAAATGGATCTAGAACAGTTTTTGCCAAAGTTACTGTACCAACCATCACCTTGTTGCTGGAGGAGTGCACGGAAAAGCTGAATCTGAACATGGCTGCACGACGAGTATTCTTGGCAGACGGCACTGAAGCCCTCGAACCCGAAGACATACCCTGTGAAGCCGATGTTTATGTTTCAACGGGAGAGCCCTTTTTAGATCCATTCAAAAAAATTAAAGATGGCATTAACATAATTTTGAAAATGTGGCCATGGGAAAGAATCTGTTTTAAGAGAGAAATAAAAGTACCACGGTCTAAGAATATTCTTCTAAGCATGTCATACCCAGGATATATAGAAGTACTTGCCGTTCTTATGATTATGTTGTTGCTGGGACACGGAGTAGAGCAGGTGGCAGATGTGCCTCGTCTTTTGAGAAAAGAAATTAAGAATAGTGTAGATAGTGAAAATTGCCTTAGAACTATTTCCAGATTTACTAAGAACTGTGAAGATGTAGTTAATGAGTTGTTTGAAAAGGCATTTTTAAAGTTTTCTGATTCATGGGCATACAGTTTAGGTTTTATTCACAGTTTCCTGGATCTTCTGCTTAATAGTGGCACATTTTGTATTTTCATTCTTTCCTGTATATCCTATTCTACTATTTGGCTTTCAGTGTTATCGTTTATATATCCTTACTATATAAACAGATGTGGGTCTGAAGACATTGCAAGAGATGGACCCCCCCACCGCCACCGAAAAGAATCCTTAGCCAAGAGAAACACTGGGGCGGGTCTGGTCATGATGCTTTGGAACCCACTAGGTGTGGCTAGCAAATTTAAAGGAGGGCATGAGATGATAAATCTTTCCATGTTTATCAACAAGGATCTGGAAATCTATTCCACTCCTTCTAGACCTTCATTTGCCAAGCCGTTCTCCTTGGCAAGTTTTCTTCTTTTCCTGAAAAAATTGTATCCATTGTGGTCATTAGTGAACATCAAGGTGGTAGAACAACCATATTTAAGTTCACACTGGGGAGAGGTAGGAAATAAAGATGAAATGATGATTTATGCAGGCTATCAGAGCAGACAGCTTGCTACAGCTTATGTCACGGTTAGTGGGAAGCTGGTGGTAGCATTTCAGGAAACCAGCATCTATGGATGGAGACTGGCCAGTGTATATGATATAGACCATCTGTTGTTAATGAAGAAAGTAACTTGGACAATGAATGGGCTGATGCTTCCTACTGATGTCAAAATACGGAAAACCAAACCTGTTCTTTCTATTAGAATGAAGAAACTTACCGAGAAGACCTCAGTCCGAATTCTTTTCTTTAAGAATGGCATGGGGCAGGATGGGCATGAGATTACAGTGGGAAAGGAAACAATGAAAAAGTTGTTTTATAACTACATCTGGAATTTAAAGAACTTTCACAATTTTTATGAAACTCCGGACAAGATTCATGCTTTTAAGAATGAGGTAAAGGAGAGGAGGCAATGGAATACTGGTCTTGGGTGTCGATAG

Related Sequences

bmy_15484T0 Protein

Length: 621 aa      View alignments
>bmy_15484T0
MSSQAKAVIKPTEDYLQPQFGPNRLLHSAAASEGSGLQDCSTHQTASDHSHDEISDPDSYKSNSKNNSFFISASKRNRPVSAPVGQLRVAEFSSLKFKLDQDWHRLSQRYKLQPRVIRVTAYKNGSRTVFAKVTVPTITLLLEECTEKLNLNMAARRVFLADGTEALEPEDIPCEADVYVSTGEPFLDPFKKIKDGINIILKMWPWERICFKREIKVPRSKNILLSMSYPGYIEVLAVLMIMLLLGHGVEQVADVPRLLRKEIKNSVDSENCLRTISRFTKNCEDVVNELFEKAFLKFSDSWAYSLGFIHSFLDLLLNSGTFCIFILSCISYSTIWLSVLSFIYPYYINRCGSEDIARDGPPHRHRKESLAKRNTGAGLVMMLWNPLGVASKFKGGHEMINLSMFINKDLEIYSTPSRPSFAKPFSLASFLLFLKKLYPLWSLVNIKVVEQPYLSSHWGEVGNKDEMMIYAGYQSRQLATAYVTVSGKLVVAFQETSIYGWRLASVYDIDHLLLMKKVTWTMNGLMLPTDVKIRKTKPVLSIRMKKLTEKTSVRILFFKNGMGQDGHEITVGKETMKKLFYNYIWNLKNFHNFYETPDKIHAFKNEVKERRQWNTGLGCR*