Part of scaffold_1183 (Scaffold)

For more information consult the page for scaffold_1183 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CD3EAP ENSTTRG00000008311 (Bottlenosed dolphin)

Gene Details

CD3e molecule, epsilon associated protein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007869, Bottlenosed dolphin)

Protein Percentage 94.2%
cDNA percentage 96.2%
Ka/Ks Ratio 0.4158 (Ka = 0.0286, Ks = 0.0688)

CD3EAP ENSBTAG00000023601 (Cow)

Gene Details

DNA-directed RNA polymerase I subunit RPA34

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000032197, Cow)

Protein Percentage 84.73%
cDNA percentage 89.76%
Ka/Ks Ratio 0.37171 (Ka = 0.0796, Ks = 0.2143)

CD3EAP  (Minke Whale)

Gene Details

CD3e molecule, epsilon associated protein

External Links

Gene match (Identifier: BACU002111, Minke Whale)

Protein Percentage 97.34%
cDNA percentage 98.29%
Ka/Ks Ratio 0.39199 (Ka = 0.0121, Ks = 0.0308)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1593 bp    Location:517517..519991   Strand:+
>bmy_15597
ATGGGTCCCGGGATGGCGGGGACCCACTCAGGCGGTGCTGCTCGGTTTTCTTGTCCCCCCAACTTTACTGCGACACCCCCAGCCTCAGAGCACACTCGTTTCTCTTTGGAGGCGTTGACCGGCCCAGATACAGAACTGTGGCTYATCCAGGCCCCTGTAGACTTCGCCCCAGACTGCCTCAATGGGCGACTCGTGCCTCTCTCTGGCTCCCAGATCTTGAAGGGCAAGTTGGCAGGCAAGCGGCACCGCTACCGGGTCCTCAGCAGCAGTGGCCCTCAGGCTGGAGGAGGAGCAACCCTGCTGGCCCCCTCAGCGGAGGCGGGAGGGGGACTCACCTGTGCCCCGGCGCTACAGGGCAGCCTGAGGATCTTGGAGGGTCCCCAGGAATCCCTAACAGGGACCCTGCTGCAGCCCATTCCAGCAAATCCCCCGCCACAGATCCCCCCTGGCCTGAAGCCTCGGTTCTGTGCCTTTGGAGGCAGCCCACCAGTCACAGGGCCTGGGTCAGTCTTGGCGTTGAAGTCACTGGCCTCCGGGAAGAGGAAAAAGAAGAGGCATGTGCCAGAGGCCTCAGTTCCTCAGGAGGCTGTGAATGAGCCTGGGGCCCCGGAGGTGGACACAGCTTTGGGGTCCTCAGAGGTGGATGTGGGGAAGAAGAAAAAAAAGCAGCAGCTGAAAGACCTGGAGGTGACAGAGCCACTGGCAACAGAGCCTGCTGCTGAGATGTTGGAGCCTCTGGGAGCGCTGTCCCCAGCCACCACCAAGAAGAGGAAAAAGAAGCCCAAAGAGGTAGAAATGGTCAAGCCAGAAATGGGGGTGCTGGAGTCAGAAGAAAAGACAGTGGAGCTGGAACTCATGGTTAAAAGTGAGCCTCTGGAAGAGACAGTCCTATCCCCCAGCAAGAAGAGGAAGAAGCAGAAGAGGACAGATGGGATGGAGCCAGTAGAGGGGACGATAGTTGAGCCTCAGCTGCAGGTGAAGATGGAGGCACAGGAGGAAGCCATCCCACTGCCGTCCTCGAAGAAGAAGAAAAAAGAAAAGGGGTACAAAGTGATGACGGAGCCAGGGACTGAGGTTATAGAGCCAGAGATGAAACCTCTGGAGCTCCCAGGGGAGATGATGGAGCCTGAGCTGCCACATGAAGTGAAGCCGCAGGCTGAGGCAGTTCTGGCATCCCCCAAAAAGAGAAGGAAGAAAGAAAAACGACAAAATGCGATGATGGAGCCAGGGACAGAGGTGGTGGAGCCACAGGAAGAGGTGATGGAGCCCGAGCCTCAGGCAGCTCTAGCATCCACCAAGAAGAAGAAGAAGAAGAAAGAAAGAGGGCACAAAGCGACAGAGCCAGGGACTGAGATGATTAACCCACAAGGTGAGATGATGGCGCCCGAGCTGCCAGATGAGGGGCAGTCTGAGGCCGGGGCCGATCCGGTATCCACCAAGAAGAAGAAAAAGCGGGGCCAGGAAAGCCGGGTGCCAGAGACAGCATCCCAGGAGGAGATGCCAGAGCTGCTGCTGAATCCCGAGTCTGGGGAGGTGGCTCCCACGGGACAGGAGAGGAAGAGGAAGAAGAAGCCGCAGCAGGATCCCGTGTAA

Related Sequences

bmy_15597T0 Protein

Length: 531 aa      View alignments
>bmy_15597T0
MGPGMAGTHSGGAARFSCPPNFTATPPASEHTRFSLEALTGPDTELWLIQAPVDFAPDCLNGRLVPLSGSQILKGKLAGKRHRYRVLSSSGPQAGGGATLLAPSAEAGGGLTCAPALQGSLRILEGPQESLTGTLLQPIPANPPPQIPPGLKPRFCAFGGSPPVTGPGSVLALKSLASGKRKKKRHVPEASVPQEAVNEPGAPEVDTALGSSEVDVGKKKKKQQLKDLEVTEPLATEPAAEMLEPLGALSPATTKKRKKKPKEVEMVKPEMGVLESEEKTVELELMVKSEPLEETVLSPSKKRKKQKRTDGMEPVEGTIVEPQLQVKMEAQEEAIPLPSSKKKKKEKGYKVMTEPGTEVIEPEMKPLELPGEMMEPELPHEVKPQAEAVLASPKKRRKKEKRQNAMMEPGTEVVEPQEEVMEPEPQAALASTKKKKKKKERGHKATEPGTEMINPQGEMMAPELPDEGQSEAGADPVSTKKKKKRGQESRVPETASQEEMPELLLNPESGEVAPTGQERKRKKKPQQDPV*