Sequence detailsbmy_15765 (Coding sequence)

Part of scaffold_1208 (SequenceType object (1))

For more information consult the page for scaffold_1208 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TJP3ENSTTRG00000004394 (Bottlenosed dolphin)

Gene Details

tight junction protein 3

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004143, Bottlenosed dolphin)

Protein Percentage 92.82%
cDNA percentage 93.6%
Ka/Ks Ratio 0.23025 (Ka = 0.0173, Ks = 0.0752)

BT.59823ENSBTAG00000018342 (Cow)

Gene Details

tight junction protein ZO-3

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000024404, Cow)

Protein Percentage 89.18%
cDNA percentage 90.77%
Ka/Ks Ratio 0.18191 (Ka = 0.0531, Ks = 0.2916)

TJP3 (Minke Whale)

Gene Details

tight junction protein 3

External Links

Gene match (Identifier: BACU006477, Minke Whale)

Protein Percentage 98.52%
cDNA percentage 98.56%
Ka/Ks Ratio 0.17401 (Ka = 0.0067, Ks = 0.0385)

Additional orthologs identified in other species via the OPTIC pipeline.

TJP3 (Human)   Tjp3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2724 bp    Location:164374..181473   Strand:+
Raw sequence 
>bmy_15765
ATGTCCACCTTCCCTGTCACCTCCCACCAGGTGCTGGACATGGAGGAGCTGACCATCTGGGAACAGCACACAGCCACGATCAGCAAGGACCCCCGCCGAGGCTTCGGCATTGCAATATCTGGTGGCCGAGACCGGCCCAGTGGATCAGTGGTTGTGTCCGATGTGGTGCCCGGAGGACCAGCTGAGGGCCGGCTACAGACAGGGGACCACATCGTCATGGTGAATGGGGTCTCCATGGAGAGTGTCACCTCCACCTTCGCCATTCAGATACTCAAGACCTGCACAAAAGTGGCCAACATTACAGTCAAGCGTCCCCGGAAAGTCCAGCTGCCCACCACCAAGGCCACCTCTGGCCGGGGACACCAGGACTCGGACGAGGAAGATGGGCCGCGGCGGCTGGACGAGGCTGACCACGGCCAGGGCTACGAGGGTGACACGTCCAGCGGCTCTGGCCACTCCTGGGGCGAGCGCTCCCGCCGGCCAAGGACAGGTCGCCGGAGCCGGGCCGGCAGCCATGGGCGCAGGAGCCCAGGCGGTGGCTCCGAGGCCAACGGGCTGGCCCTAGTGTCTGGCTTCAAGCGGCTGCCGCGGCAGGACGTGCAGATGCGGCCCGTGAAGTCCGTGCTGGTGCGGAGGAGAGACAGTGATGATTTCGGGGTCAAACTGGGCAGTCAGATCTTCATCAAGCACATCACAGAATCGGGCCTGGCTGCCCAGAACAGCAGGCTCCAGGAAGGAGACCTCATCCTACAGATCAACGGGGTGTCCAGTGAGAATCTGTCACTGAGTGACACACGGCAACTGATCGAGAAGTCGGAAGGGAAACTGACTCTGCTGGTGCTCAGGGACCGAGGCCAGTTCCTGGTGAATATCCCTCCGGCCGTCAGCGACAGCGACAGCTCCCTTCTGGAGGACATCTCAGACCTCGGGTCAGAACTGTCTCAGGCGCCACCATCCCATGTACCACCGCCACCCCAGCATGGGCAGTGGAGTCCGGACGCCAGCCGAACCAGCTCCCCCATGGAGAGCCCCCAGCTTCGGCAGGAAAGTTCAGTGGATTCTAGGACTGCGTCAGAACCAGACTCCCCGAGGCAAAGGAGCTGTGACATGCACAGCGTGCCCAGCGGTCAGAGTGTGGAGGACCACGGGTACAGCCCCGCCTCGCGGGTGGTCCGCTTCCTCAAGGGCGCAAACATTGGGCTGCGGCTGGCCGGAGGCAATGACGTGGGCATCTTCGTGTCCGGGGTGCAGGCRGGCAGCCCGGCTGACGGGCAGGGYATCCAGGAGGGAGATGAGATTCTGCAGGTGAATGACACTCCATTCCAGAACCTGACCCGGGAGGAGGCTGTGCAGTTCCTGCTGGAGCTGCCCCCGGGCGAGGAGGTGGAGCTGGTGATGCAGCGGAAGCAGGACATCTTCCGGAAGATGGTGCAGTCCCGCGTGGGCGACTCCTTCTACATCCGCATGCACTTTGAGATGGAGCCCAGCCCGCCGTCTGGCCTGGGCTTCACCCGCGGAGACGTCTTCCACGTGCTGGACACGCTGTACCCTGGCCCTGGGCAGAGCCATGCCCGCGGAGGCCACTGGCTGGCGGTGCGCATGGGGCGTGACCTCCGGGAGAAAGAGCGGGGCATCATCCCCAACCAGAGCAGGGCGGAGCAGCTGGCCAGTCTGGAGGCTGCCCAGCGGGTCGCGGGGTTCGGGCCTGGAGCCTCAGCGGGCTCCAGCACACGGGCCGAGTTCTGGCGGCTGCGGGGTCTTCGTCGGGGAGCCAAGAAGACCACCCATCGGAGCCGCGAGGATCTGTCGGCTCTGACCAGACAGGGTCATTACCCGCCATATGAACGCGTGGTGCTGCGAGAAGCCAGTTTCAAGCGCCCGGTGGTGATCCTGGGACCCGTGGCTGACATTGCTATGCAGAAGTTGACTGCTGAGATGCCTGACGAGTTTGAAATTGCAGCCATTGAGCGCCTTAACTACGTGCAGTACTACCCAATCGTGGTCTTCTGTGTCCCCGAGAGCCGGACAGCCCTCAAGGCACTGCGCCAATGGCTGGCCCCCACCTCCCGCCGCAACTCCCGCCGCCTCTACGCTCAGGCCCAGAAGCTGAGGAAGCACAGTGACCACCTCTTCACAGCCACCATCCCCCTGCAGGGCACAAGCGACTCCTGGTACCAAGAGCTCAAGGCTATCATCCGCGAGCAGCAGACGCGGCCCATCTGGACGGCCGAGGACCAGATCAGGGAGGGCCGGGGCTCGGCTCAGCCAGGCCATGTGCACCCGCAGCTGGACAGCTCCTCAGAGGACAACCTGGACCTCCCTCATCGCAGCCTGGCTGACAGCTCCGCGGACCTGAGCTGTGACAGCCGGCTCAACAGCGACTATGAGACAGATGGTGAGGGCGGCGTCTACACAGACGGCGAGGGCTACACCGATGGCGAGGGTGGGCCCCACATGGACGTGGACGAGGGGCCCCTGGCGCCAGCCCTGGCCCGGTCCTCGGAGCCCGTGCTGGAGGATGAGCCTCAGATCCTGCAAGATCACGGGAGATCCTCGGGTCACCGGGGGACCCAGGTGGATGGCCGCCACCCACAGGGTCAATGGCGACAGGACAGCATGCGGACATATGAGCGGGATGCTCTGAGGAAAAAGTTTACACGAGCCCGAGATGTGGAGTCCTCTGACGAAGATGGCTATGACTGGGGACCGGCCACTGACCTGTGA

Related Sequences

bmy_15765T0 SequenceType object (3)

Length: 908 aa      View alignments
>bmy_15765T0
MSTFPVTSHQVLDMEELTIWEQHTATISKDPRRGFGIAISGGRDRPSGSVVVSDVVPGGPAEGRLQTGDHIVMVNGVSMESVTSTFAIQILKTCTKVANITVKRPRKVQLPTTKATSGRGHQDSDEEDGPRRLDEADHGQGYEGDTSSGSGHSWGERSRRPRTGRRSRAGSHGRRSPGGGSEANGLALVSGFKRLPRQDVQMRPVKSVLVRRRDSDDFGVKLGSQIFIKHITESGLAAQNSRLQEGDLILQINGVSSENLSLSDTRQLIEKSEGKLTLLVLRDRGQFLVNIPPAVSDSDSSLLEDISDLGSELSQAPPSHVPPPPQHGQWSPDASRTSSPMESPQLRQESSVDSRTASEPDSPRQRSCDMHSVPSGQSVEDHGYSPASRVVRFLKGANIGLRLAGGNDVGIFVSGVQAGSPADGQGIQEGDEILQVNDTPFQNLTREEAVQFLLELPPGEEVELVMQRKQDIFRKMVQSRVGDSFYIRMHFEMEPSPPSGLGFTRGDVFHVLDTLYPGPGQSHARGGHWLAVRMGRDLREKERGIIPNQSRAEQLASLEAAQRVAGFGPGASAGSSTRAEFWRLRGLRRGAKKTTHRSREDLSALTRQGHYPPYERVVLREASFKRPVVILGPVADIAMQKLTAEMPDEFEIAAIERLNYVQYYPIVVFCVPESRTALKALRQWLAPTSRRNSRRLYAQAQKLRKHSDHLFTATIPLQGTSDSWYQELKAIIREQQTRPIWTAEDQIREGRGSAQPGHVHPQLDSSSEDNLDLPHRSLADSSADLSCDSRLNSDYETDGEGGVYTDGEGYTDGEGGPHMDVDEGPLAPALARSSEPVLEDEPQILQDHGRSSGHRGTQVDGRHPQGQWRQDSMRTYERDALRKKFTRARDVESSDEDGYDWGPATDL*