Part of scaffold_1208 (Scaffold)

For more information consult the page for scaffold_1208 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

APBA3 ENSTTRG00000004405 (Bottlenosed dolphin)

Gene Details

amyloid beta (A4) precursor protein-binding, family A, member 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004150, Bottlenosed dolphin)

Protein Percentage 93.28%
cDNA percentage 93.82%
Ka/Ks Ratio 0.19128 (Ka = 0.043, Ks = 0.2248)

APBA3 ENSBTAG00000008395 (Cow)

Gene Details

amyloid beta A4 precursor protein-binding family A member 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011048, Cow)

Protein Percentage 88.69%
cDNA percentage 88.46%
Ka/Ks Ratio 0.15731 (Ka = 0.0665, Ks = 0.4226)

APBA3  (Minke Whale)

Gene Details

amyloid beta (A4) precursor protein-binding, family A, member 3

External Links

Gene match (Identifier: BACU006478, Minke Whale)

Protein Percentage 94.56%
cDNA percentage 96.25%
Ka/Ks Ratio 0.63735 (Ka = 0.0354, Ks = 0.0555)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1809 bp    Location:188687..181573   Strand:-
>bmy_15766
ATGGAATTCCTGACAACCTCCCAACCCCCTCCAGGACCTCCAGCCATGGACTTGGAAGAGCCCAGGGACACACTTTCACCCTCTCAGGACCTCACCCCTGATTGCCAGTGGCACCCGGCACCAGGAGGCCCCGGCAGCCTGAGTCAGATGGAACTTGACGGGCTAAATATTCAGGACCTGCTGCAACAGTTTGAAGCTCTGCCAGGTGATCTGGTGGGCCTGTCCCCAGATGGACCCCCGTGCCCCTTGCACATTGCCACTGGCCATGGCCTGGCCCCTCAGGACATCACCGATGCCCATGGGCTCTTGTCCGCCGAGGCTGGCCGGGAAGACTTGCTGAGCCTCTTGCAGCAAGACGAGCGCTCTCCTTCCCAGTCAGGTCCCCAGGAACCTCCGGACCCTGCTCCTCGCCTGTTGCAGCCCCCTGATGACCCAGAAGGGGATATGGGCCCCCAGGAGTGGGCAGAAGGAGCCTCTGTCGAGCAGGACGAGGGCAGGAGCTCAAGCAGCTCCCCAGAACCCTGGCTGGAGACAGTACCTCTGGTCACTTCTGAAGAGCCACCTGCCAGTGCCCAGAGCCCCAAGACCTTGGCTTCCTACCCAGCCCTCCAGGAGGTGTCCGGCCCCTGTGACCACGAAGACCTCCTAGATGGTGTCATATTCGGGGCCAAATACCTGGGCTCCACCCAGCTGGTGTCCGAGCGAAACCCGCCCCCCAGGACGCGCATGGCGCAGGCCCAGGAGGCCATGGACCGCGTCAAGGCCCCCGATGGGGAGACCCAGCCCATGACAGAGGTAGACCTCTTCGTCTCCACCAAGAGGGTCAAGGTTCTGACGGCTGACTCCCAGGAGGCCCTGATGGACCACGCCCTGCAGACCATCTCCTACATCGCCGACATCGGCAGCGTCCTGGTGCTCATGGCCCGGCGGCGGATGGCCCGGCGGCCGGCGCCCCAGCCCCACAGCCGCCGGCTCTACAAGATGATCTGCCACGTTTTCCACTCAGAGGACGCCCAGCTCATTGCCCAGGCCATTGGCCAGGCCTTCGCCGTGGCCTACAGCCAGTTCCTGCGGGAAAGCGGGATCAACCCCAGCCAGGTGGGCTCCCAGCAGAGCCAGGGGACCACGGGCCCCGGCCACCTCCACAACGGGGACCTCGACCACTTCTCCAACAGCGAGAACTGCAGGGAGGTGAGCAAGCGGGTCCCCCCACCCCGGCCCACCGAGTGTGCATCGAGAAGCGCCGGGGTGAGGGTCGGGGGCCCCGCCGAGCGCTCAGGGGCCCTCAGCATCGGAGACCGCATCACCGCCATCAACGGGACCAGCCTGGTGGGGCTGCCCCTGGCCGCCTGCCAGGCTGCCGTCCGCGTTCCATTTTATGAGTGGGTAAACAGGCCCAGGAGGGGCTGCAGCTCAACAGGAAGTCTGGCAGCCCCCCGGAGGCCCAGCCAGGTCAACAGCCCCCATCCTGCACAGGAAGTGAAGTCTCAGACGCTGGTGACCCTCAGCATCGTCCACTGCCCGCCGGTCACCACGGCCATCATCCGCCGGCCCCACGTCCGCGAGCAGCTGGGCTTCTGCGTGGAGGACGGCATAATCTGCAGCCTCCTCCGGGGTGGCATTGCCGAGCGCGGGGGCGTCCGCGTGGGGCACCGCATCATTGAGATCAACGGGCAGAGTGTGGTGGCCACGCCCCACGCCCGCATCATTGAGCTGCTCACGGAGGCCCACATTGAGGTCCACATCAAGACGATGCCCGCTGCCACCTACCGCCTGCTCACAGGCCAGGAGCAGCCGGTGTACCTGTGA

Related Sequences

bmy_15766T0 Protein

Length: 603 aa      View alignments
>bmy_15766T0
MEFLTTSQPPPGPPAMDLEEPRDTLSPSQDLTPDCQWHPAPGGPGSLSQMELDGLNIQDLLQQFEALPGDLVGLSPDGPPCPLHIATGHGLAPQDITDAHGLLSAEAGREDLLSLLQQDERSPSQSGPQEPPDPAPRLLQPPDDPEGDMGPQEWAEGASVEQDEGRSSSSSPEPWLETVPLVTSEEPPASAQSPKTLASYPALQEVSGPCDHEDLLDGVIFGAKYLGSTQLVSERNPPPRTRMAQAQEAMDRVKAPDGETQPMTEVDLFVSTKRVKVLTADSQEALMDHALQTISYIADIGSVLVLMARRRMARRPAPQPHSRRLYKMICHVFHSEDAQLIAQAIGQAFAVAYSQFLRESGINPSQVGSQQSQGTTGPGHLHNGDLDHFSNSENCREVSKRVPPPRPTECASRSAGVRVGGPAERSGALSIGDRITAINGTSLVGLPLAACQAAVRVPFYEWVNRPRRGCSSTGSLAAPRRPSQVNSPHPAQEVKSQTLVTLSIVHCPPVTTAIIRRPHVREQLGFCVEDGIICSLLRGGIAERGGVRVGHRIIEINGQSVVATPHARIIELLTEAHIEVHIKTMPAATYRLLTGQEQPVYL*