Part of scaffold_1208 (Scaffold)

For more information consult the page for scaffold_1208 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TCF3 ENSTTRG00000004417 (Bottlenosed dolphin)

Gene Details

transcription factor 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004162, Bottlenosed dolphin)

Protein Percentage 70.77%
cDNA percentage 72.07%
Ka/Ks Ratio 0.2581 (Ka = 0.0905, Ks = 0.3507)

TCF3 ENSBTAG00000008695 (Cow)

Gene Details

transcription factor E2-alpha

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000028599, Cow)

Protein Percentage 81.44%
cDNA percentage 84.02%
Ka/Ks Ratio 0.20604 (Ka = 0.1146, Ks = 0.5562)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2079 bp    Location:240180..224523   Strand:-
>bmy_15770
ATGGGCAGTGCTAGGGTGGGTGCATCTGGACGGGCTGCAGCACCAGGCTGGGTCGGGAGGGGCCTGGAAAGCTTCCCAGGTCGAGTGAGGGCTCCCCGAGGCAGTGCGGCTGGTGTGGAGCGGCCGGGGGCCGGGCCCCTAACCCTGCCTTCCTGCCCTGCAGGTCTCGAGGACCGGCCCAGTTCGGGCTCGTGGGGCGCCGGCGAGCAGAACAGTTCCTCCTTCGACCCCAGCCGGACCTACGGTGATGGCGCCCACTTCAGTGAGTCCCACGGCACCCTCGCTTCGTCCACATTCCTGGGACCTGGGCTCGGAGGCAAGGGCGGCGAGCGGGGCGCATACACCCCCTTTGGGAGAGACGCGGGGGTCGGCAGCCTGACTCAGGCCAGCTTCCTGCCCAGCGAGCTGGCCCTCAGCAGCCCGGGGCCGCTGTCCCCCTCGGGCGTCAAAGGCGGGCCCCACTATTACTCCTACTCTGGTCACCCTCGGCGGAGAGCGGCGGATGGCGGCCTGGACACGCAGCCCAAGAAAGTCCGGAAGGTGCCGCCGGGTCTCCCATCCTCGGTGTACCCACCCAGCTCAGGTGACGACTACAGCAGGGACACCGCCGCCTACCCACCCACCAAGACCCCCAGCGGCGCCTACCCCGCCTCCTTCTATGTGGCAGACGGCAGCCTGCACCCCTCGGCCGAGCTCTGGAGCCCCCCAGGCCAGGTGGGCTTCGGGCCCATGCTGGGCGGGGGCTCGTCCCCCCTGCCCCTCCCGGCAGGTGGCAGCAGCTCCGTGGGCGGCAGTGGCAGCGGTGGGTTTGGCGGCCTGCACCAGCACGAGCGCATGGTAGGCCCCACGGGGTGGCCGTGGCGGGGGAGGTGTGTGGGCCGTGCCCCGTCTGACCCTTCCTACCCCGTCCCCCGCACACAGGGCTACCAGCTGCATGGAGCAGAGGTGAACGGCGGGCTCCCGGCTGTGTCCACCTTCTCCTCGGCCCCCACGGGCGCCTACAGCAGCGTCTCCAGCCACACGCCCCCCGTCAGCGGGGCCGACAGCCTCCTGGGCTCCCGTGGAACCACGGCTGGCAGCTCTGGGGACGCCCTTGGGAAGGCGCTGGCCTCGATCTACTCCCCAGACCAGTCAAGCAATAACTTCTCATCCAGCCCCTCCACCCCCGTGGGCTCCCCACAGGGCCTGGCAGGTCTGTGCAGCGTGCTGGGGGAGGGGACTGGGTCTGCTGACTGTAGCCCCGGGTGGGCGGGGAGCTGGACAGACCACATGCCTCAGAGCTCACGTTCCCATGGCCGTCGAGGAGGGCTCCCTAGAGGATGGGGGGCTTCCAAGCCAATGCTCCTAGGTCACAGCAGAGGCAAAGGCACCTCACCCCTTTCCACCCCACAGCAGAGCAAGATGGAGGACCACCTGGACGAGGCCATCCACGTCCTCCGCAGCCACGCTGTGGGCACAGCGGGGGACGTGCACGGACTGCTGCCCGGCCACGGGGCGCTGGCCTCGGGCTTTGCTGGCGCTGTCATGCCACTGGGTGGGCGGCACGCTGGCCTGGTGGGCAGCAGCCACTCGGAGGACGGCCTCTCCAGCAGCGGCGGCCTCGTGCACAACCACGTGGCCCTCCCCGACCTCTCCCGGCCGCCTGACTCCTACAGTGATCTCGGGCGCGGCGCCGCCCCGGGGCCCGGCGACATCAAGCGGGAGGAGCAGGAGGACGAAGAGAACGAGAAAGACCTGAGGGACCGGGAGAGGCGCATGGCCAATAACGCGCGGGAGCGGGTGCGCGTGCGGGACATTAACGAGGCCTTCCGGGAGCTGGGGCGCATGTGCCAGCTGCACCTCAAGTCGGACAAGGCGCAGACCAAGCTGCTCATCCTGCAGCAGGCCGTGCAGGTCATCCTGGGCCTGGAGCAGCAGGTGCGAGAGCGTAACCTGAACCCCAAAGCGGCCTGCTTGAAGCGCCGAGAAGAGGAGAAGGTGTCCGGCGTGGTCGGAGACGCCCAGATGGTGCTGTCGGCCGCCCACCCCGGCCTGGGCGAGGCCCACAACCCTGCCGGGCACATAAGAAAATTAGAATAA

Related Sequences

bmy_15770T0 Protein

Length: 693 aa      View alignments
>bmy_15770T0
MGSARVGASGRAAAPGWVGRGLESFPGRVRAPRGSAAGVERPGAGPLTLPSCPAGLEDRPSSGSWGAGEQNSSSFDPSRTYGDGAHFSESHGTLASSTFLGPGLGGKGGERGAYTPFGRDAGVGSLTQASFLPSELALSSPGPLSPSGVKGGPHYYSYSGHPRRRAADGGLDTQPKKVRKVPPGLPSSVYPPSSGDDYSRDTAAYPPTKTPSGAYPASFYVADGSLHPSAELWSPPGQVGFGPMLGGGSSPLPLPAGGSSSVGGSGSGGFGGLHQHERMVGPTGWPWRGRCVGRAPSDPSYPVPRTQGYQLHGAEVNGGLPAVSTFSSAPTGAYSSVSSHTPPVSGADSLLGSRGTTAGSSGDALGKALASIYSPDQSSNNFSSSPSTPVGSPQGLAGLCSVLGEGTGSADCSPGWAGSWTDHMPQSSRSHGRRGGLPRGWGASKPMLLGHSRGKGTSPLSTPQQSKMEDHLDEAIHVLRSHAVGTAGDVHGLLPGHGALASGFAGAVMPLGGRHAGLVGSSHSEDGLSSSGGLVHNHVALPDLSRPPDSYSDLGRGAAPGPGDIKREEQEDEENEKDLRDRERRMANNARERVRVRDINEAFRELGRMCQLHLKSDKAQTKLLILQQAVQVILGLEQQVRERNLNPKAACLKRREEEKVSGVVGDAQMVLSAAHPGLGEAHNPAGHIRKLE*