Part of scaffold_1228 (Scaffold)

For more information consult the page for scaffold_1228 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CDX4 ENSTTRG00000010851 (Bottlenosed dolphin)

Gene Details

caudal type homeobox 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010291, Bottlenosed dolphin)

Protein Percentage 96.36%
cDNA percentage 96.06%
Ka/Ks Ratio 0.42592 (Ka = 0.0308, Ks = 0.0723)

CDX4 ENSBTAG00000001726 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002260, Cow)

Protein Percentage 91.86%
cDNA percentage 90.95%
Ka/Ks Ratio 0.18717 (Ka = 0.0495, Ks = 0.2647)

CDX4  (Minke Whale)

Gene Details

caudal type homeobox 4

External Links

Gene match (Identifier: BACU012828, Minke Whale)

Protein Percentage 97.81%
cDNA percentage 97.09%
Ka/Ks Ratio 0.27081 (Ka = 0.0182, Ks = 0.0672)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 666 bp    Location:495811..489181   Strand:-
>bmy_15875
ATGTACAGAAGCTGCCTTTTGGAAAAAGAAACGGGCATGTACTCGGGCACTCTCAGGAGCCCCGCAGGAGGTGGCACAGCCGGGGCTGGCGCCACTGGGGACGGTGGGAGTCCGATGCCAGCCTCCAACTTCGCAGCGGCCCCGTCTTATGCGCACTATATGGGGTATCCCCATATGCCCGGTATGGATCCTCACGGGCCATCGCTGGGGGCCTGGGGGTCACCCTATAGTCCCCCTCGGGAAGACTGGAGCGTGTACCCCGGGCCGTCCAGTACAATGGGCACGGTGCCCATGAACGACATGACCTCGAGCCCCACTGCTTTCGGCTCGCCGGAATACAGCAACCTGGAACCCGCAGGGGGTGGAAACAGCGGTAGCAGCCTGCCTACACCAGCCGGCGGATCACTGTTCCCCATCGATGCCTGCACCGCCGACGCCAGTTCTAACAGAAGCCGCCACAGCCCCTATGCGTGGATGCGCAAGACCGTGCAGGTGACTGGGAAAACCAGGACAAAAGAAAAGTATCGTGTGGTTTACACAGATCATCAAAGGTTGGAGCTGGAGAAGGAATTCCACTGCAATAGATATATCACCATTCGGAGAAAATCAGAGCTGGCAGTCAACTTGGGCCTTTCTGAGAGACAGGTACACCAGAAGTACATCTAA

Related Sequences

bmy_15875T0 Protein

Length: 222 aa      View alignments
>bmy_15875T0
MYRSCLLEKETGMYSGTLRSPAGGGTAGAGATGDGGSPMPASNFAAAPSYAHYMGYPHMPGMDPHGPSLGAWGSPYSPPREDWSVYPGPSSTMGTVPMNDMTSSPTAFGSPEYSNLEPAGGGNSGSSLPTPAGGSLFPIDACTADASSNRSRHSPYAWMRKTVQVTGKTRTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVHQKYI*