Part of scaffold_1277 (Scaffold)

For more information consult the page for scaffold_1277 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SASS6 ENSTTRG00000015289 (Bottlenosed dolphin)

Gene Details

spindle assembly 6 homolog (C. elegans)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014496, Bottlenosed dolphin)

Protein Percentage 65.27%
cDNA percentage 66.37%
Ka/Ks Ratio 0.5303 (Ka = 0.0176, Ks = 0.0332)

SASS6 ENSBTAG00000015778 (Cow)

Gene Details

spindle assembly abnormal protein 6 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020951, Cow)

Protein Percentage 95.82%
cDNA percentage 95.32%
Ka/Ks Ratio 0.12742 (Ka = 0.019, Ks = 0.1488)

SASS6  (Minke Whale)

Gene Details

spindle assembly 6 homolog (C. elegans)

External Links

Gene match (Identifier: BACU002779, Minke Whale)

Protein Percentage 98.51%
cDNA percentage 99.2%
Ka/Ks Ratio 0.58837 (Ka = 0.0068, Ks = 0.0116)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1005 bp    Location:274854..268123   Strand:-
>bmy_16162
GCACAGGTTCGATACCAACAGCAGCATGAACAACAGAAAAAAGATTTAGAAATCCTCCATCAACGAAACATCCAGCAGCTACAAAACAGATTGTCTGAGTTAGAATCTGCTAATAAAGACCTCACTGAAAGGAAATATAAAGGAGACTCTACCATCAGAGAACTTAAAACAAAACTGTCTGGTGTTGAAGAGGAGCTCCAGCGGGCTAAGCAAGAAGTCCTCTCTTTGCGAAGAGAGAATTCTACACTTGATGCTGAGTGCCATGAAAAAGAAAAGCATATTAATCAGCTACAAACAAAAGTGGCTGTTCTAGACCAGGAAATCAAGGATAAGGATCAGCTTGTTTTAAGAACAAAAGAAGTATTTGATACAATCCAGGAACAAAAGGTGGCTTTAGAAGAAAATGGTGAGAAAAATCAGGTACAACTAGGAAAACTTGAAGCTACAATAAAATCATTATCAGCTGAACTTCTTAAGGCAAATGAAATTATCAAAAAGTTGCAAGGGGATCTGAAGACCTTAATGGGTAAATTGAAACTGAAGAATACAGTTACTATTCAGCAAGAGAAACTCTTGGCTGAGAAGGAAGAAAAATTACAAAAGGAACAAAAAGAATTACAAGATGTTGGACAGTCTCTCCGAATTAAAGAGCAAGAGGTATGCAAATTACAAGAACAATTAGAAGCTACAGTTCAAAAACTTGAAGAAAGCAAACAGCTTCTAAAAAATAATGAGAAGTTAATCACATGGTTAAATAAAGAATTAAATGAAAATCAGCTAGTGAGAAAGCAAGATGTATTGGGACCTTCAACCACTCCACCTGTACATTCTAGTATCAACACCATCAGAAGTGGAATTTCTCCTAACTCTAATGTGGTTGAGAGTAGACTGACTTACCCAACTTGTGGGATTGGTTATCCTGTCTCCTCTGCATTTGCATTCCAGAATACCTTTCCTCATCCTATAGCTGCCAAAAATACCATCCACCCAGTTTCAGGACCAAAG

Related Sequences

bmy_16162T0 Protein

Length: 335 aa      View alignments
>bmy_16162T0
AQVRYQQQHEQQKKDLEILHQRNIQQLQNRLSELESANKDLTERKYKGDSTIRELKTKLSGVEEELQRAKQEVLSLRRENSTLDAECHEKEKHINQLQTKVAVLDQEIKDKDQLVLRTKEVFDTIQEQKVALEENGEKNQVQLGKLEATIKSLSAELLKANEIIKKLQGDLKTLMGKLKLKNTVTIQQEKLLAEKEEKLQKEQKELQDVGQSLRIKEQEVCKLQEQLEATVQKLEESKQLLKNNEKLITWLNKELNENQLVRKQDVLGPSTTPPVHSSINTIRSGISPNSNVVESRLTYPTCGIGYPVSSAFAFQNTFPHPIAAKNTIHPVSGPK