Part of scaffold_1298 (Scaffold)

For more information consult the page for scaffold_1298 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PPWD1 ENSTTRG00000006530 (Bottlenosed dolphin)

Gene Details

peptidylprolyl isomerase domain and WD repeat containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006178, Bottlenosed dolphin)

Protein Percentage 85.62%
cDNA percentage 85.32%
Ka/Ks Ratio 0.08937 (Ka = 0.0023, Ks = 0.0257)

PPWD1 ENSBTAG00000009514 (Cow)

Gene Details

Peptidylprolyl isomerase domain and WD repeat-containing protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012520, Cow)

Protein Percentage 98.89%
cDNA percentage 97.2%
Ka/Ks Ratio 0.04715 (Ka = 0.005, Ks = 0.1066)

PPWD1  (Minke Whale)

Gene Details

peptidylprolyl isomerase domain and WD repeat containing 1

External Links

Gene match (Identifier: BACU006229, Minke Whale)

Protein Percentage 99.78%
cDNA percentage 99.78%
Ka/Ks Ratio 0.14529 (Ka = 0.001, Ks = 0.0066)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1359 bp    Location:1460..16066   Strand:+
>bmy_16267
TATTTTCCTGGACAGTGTGAGTGGATCTATTGCCCAGGGGATGCCATATCTTCAGTTGCTGCTTCTGAGAAGAGTACAGGAAAAATTTTCATTTATGACGGTCGAGGAGATAACCAGCCGCTACATATTTTTGACAAACTCCATATATCACCTCTTACTCAGATACGGCTAAACCCAGTTTACAAAGCAATAGTGTCTTCTGACAAATCTGGAATGATTGAATACTGGACCGGTCCTCTTCATGAATATAAATTCCCCAAAAATGTGAACTGGGAATATAAAACTGACACAGATTTATATGAATTTGCCAAGTGCAAGGCTTATCCAACCAGCATATGTTTTTCACCTGATGGGAAGAAAATAGCTACTATTGGTTCTGATAGAAAAATGTTTACTGAACTGCAGCAGATGAGGCAACAGCTACCAGACATGGAATTTGGCCGACGCATGGCTGTAGAACGTGAATTGGAGAAGGTGGATGCAGTAAGATTAATTAATATAGTTTTTGATGAAACTGGACACTTTGTGCTATATGGAACAATGCTGGGCATTAAAGTTATAAATGTAGAAACAAACCGGTGTGTGCGGATCTTAGGCAAGCAAGAAAATATTAGAGTGATGCAATTGGCGTTGTTCCAGGGAATAGCCAAAAAACATCGTGCTGCAACTACTATAGAAATGAAAGCTTCTGAAAACCCTGTTCTTCAGAATATTCAAGCTGACCCAACAATAGTCTGTACATCTTTCAAAAAGAATAGATTTTATATGTTTACTAAACGAGAACCAGAAGATACAAAAAGTGCGGATTCTGACCGAGATGTTTTTAATGAGAAACCTTCTAAAGAAGAAGTCATGGCAGCTACTCAAGCTGAGGGACCTAAACGAGTGTCAGATAGTGCCATTATCCACACGAGCATGGGAGACATTCACATCAAACTTTTTCCTGTTGAGTGCCCTAAGACAGTGGAAAACTTCTGTGTTCACAGCAGAAATGGTTATTATAATGGACATACATTTCATCGCATAATTAAGGGCTTCATGATTCAGACAGGAGATCCAACAGGTACTGGTATGGGAGGAGAAAGCATATGGGGAGGAGAATTTGAAGATGAATTTCATTCAACATTACGACATGACAGACCATATACACTCAGCATGGCCAATGCTGGCTCGAATACTAATGGATCCCAGTTTTTCATAACAGTAGTACCAACGCCTTGGCTTGATAATAAGCACACAGTGTTTGGACGAGTGACTAAAGGAATGGAAGTTGTACAGAGGATCTCCAACGTCAAAGTCAATCCCAAAACAGATAAGCCCTATGAGGATGTCAGCATCATAAATATTACTGTCAAGTAA

Related Sequences

bmy_16267T0 Protein

Length: 453 aa      View alignments
>bmy_16267T0
YFPGQCEWIYCPGDAISSVAASEKSTGKIFIYDGRGDNQPLHIFDKLHISPLTQIRLNPVYKAIVSSDKSGMIEYWTGPLHEYKFPKNVNWEYKTDTDLYEFAKCKAYPTSICFSPDGKKIATIGSDRKMFTELQQMRQQLPDMEFGRRMAVERELEKVDAVRLINIVFDETGHFVLYGTMLGIKVINVETNRCVRILGKQENIRVMQLALFQGIAKKHRAATTIEMKASENPVLQNIQADPTIVCTSFKKNRFYMFTKREPEDTKSADSDRDVFNEKPSKEEVMAATQAEGPKRVSDSAIIHTSMGDIHIKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITVK*