Sequence detailsbmy_16429 (Coding sequence)

Part of scaffold_1293 (SequenceType object (1))

For more information consult the page for scaffold_1293 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLCO4A1ENSTTRG00000001754 (Bottlenosed dolphin)

Gene Details

solute carrier organic anion transporter family, member 4A1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001658, Bottlenosed dolphin)

Protein Percentage 71.61%
cDNA percentage 74.53%
Ka/Ks Ratio 0.43256 (Ka = 0.0675, Ks = 0.1561)

SLCO4A1ENSBTAG00000016388 (Cow)

Gene Details

solute carrier organic anion transporter family member 4A1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000021795, Cow)

Protein Percentage 84.96%
cDNA percentage 87.47%
Ka/Ks Ratio 0.17149 (Ka = 0.083, Ks = 0.4837)

SLCO4A1 (Minke Whale)

Gene Details

solute carrier organic anion transporter family, member 4A1

External Links

Gene match (Identifier: BACU011253, Minke Whale)

Protein Percentage 93.51%
cDNA percentage 94.93%
Ka/Ks Ratio 0.22042 (Ka = 0.0358, Ks = 0.1625)

Additional orthologs identified in other species via the OPTIC pipeline.

SLCO4A1 (Human)   Slco4a1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2370 bp    Location:320442..306937   Strand:-
Raw sequence 
>bmy_16429
ATGGATTCTTCCCGCAGATTGGACCGCTGCTGGAATTCCGCACCCACTCCCGCTGCCGTCGCTGTCACGCCCTCGGAGATGCCGCAGCACTCGATGGGGGACAAGCACTTCGTCTCGATGCCGCAGCTGGCCTTCCCCGGCCCCCCGTTGGCCACCAACAGCGAGTGTGACTGCACGCCCCCCAGCAGGCGGGCGTCCCTGGGCTCGCCCCTGAGCCAGCCGCTGTGCCAGCCGCGGCCCGAGAAGCGCGGGCCCCGGGCGACCCAGGAGGTGCGCTACGTGGCCACGGGGCGGCCGGACCAGGCCTGCGGCTGGCGGGCCTTCGCGCCCACGTGCCTGCAGGCCTTCAACACGCCCCAGGGCTTCCTGCTGTTCCTGTGCGCGGCCTCCTTCCTGCAGGGCATGACGGTGAACGGCTTCATCAACACTGTCGTCACATCCATCGAGCGGCGCTACGACCTGCACAGCTACCAGAGTGGCCTCATCGCCAGCTCTTACGACGTGGCCGCCTGCCTCTGCCTCACCTTCGTCAGCTACTTCGGAGGCCACGGCCACAAGCCTCGCTGGCTGGGCTGGGGCGTGCTGGTCATGGGCGCCGGCTCGCTGGTCTTCTCACTGCCCCACTTCACCGCCGGCCCCTACGAGGCGCAGGTGGACGAGGCCGTTGGAACATGCCGGGCCAACCGCAGCGCGACCTGCGGGGGCCGCGCCTCTGGCCTGTCCAGCTACCAGCTGGTCTTCATGCTGGGCCAGTTCCTGCACGGCATGGGCGCCACCCCGCTCTACACGCTGGGCGTCACCTACCTGGACGAGAATGTCAAGTCCAGCTACTCGCCTGTCTACATCGCCGTCTTCTACACCGCGGCCATCCTCGGCCCCGCAGCCGGCTACCTGGTCGGAGGTGCCCTGCTGAATATTTACACCGAAATAGGCCACCGGACGGAGCTGACCACTGAGAGCCCGCTGTGGGTCGGCGCCTGGTGGGTGGGCTTCCTGGGCACTGGAGCTGCCGCCTTCCTCATCGCCGTGCCCATCCTCGGCTACCCGCGGCAGCTGCCAGGCTCCCAGCGCTACGTGGTCATGAGAGCATCTGAAACACACCAGTTAAAGAACAGCAGCCACAGGGTGACCAGCAACCCTGACTTCGGGAAAACCATCAGAGACCTGCCTCTCTCCATCTGGCTCCTCCTGAAGAACCCCACGTTCATCCTGCTCTGCCTGGCCGGGGCCACAGAGGCCACGCTCATCGCTGGCATGTCCACGTTTGGCCCCAAGTTCCTCGAGTCCCAGTTCAGCCTCAGTGCCTCAGAAGCTGCCACCTTGTTTGGGTACCTGGTGGTGCCGGCAGGTGGCGGAGGCACGTTCCTGGGCGGCGTCTTTGTGAACAAGTGCAAGCTCCGCGGCTTGGGCGCCATCAGGTGCTGCCAGCTCTGCGGCCTGGTCAGCATGCTGGCCTTCTTCGTCTTCTTCGCGCACTGCCCCAACGTGCCCATGGCGGGCGTGACCGCCAGCTACAACGGGAGCCTCCTGCCCGAAGGCCACCTGGGGCTGACAGCTGCCTGCAACGCCGCCTGCGGCTGCCAGCCGGAGCACTACAGCCCCGTGTGTGGCCCCGACGGCCTCATGTACTACTCGCCCTGCCACGCGGGGTGCCCGGAGGCGGCCTCGCCTGGCCCCGGTGGCCAGCAGGTGTACCGAGACTGTAGCTGTGTCCCTCAGAATTTTTCCTCTGGTTTTGGCCATGCTACCGCAGGGAAATGCACTTCAACTTGTCAAAGAAAGCCCCTCCTTCTGGTTTTCATATTCGTTGTAATTATCTTTACCTTCCTCAGCAGCATTCCTGCACTAACGGCAACTTTACGGCTCCGCCAGAGTCGAAGACCGTGGGGAATCTCCCGGCATGGAGGCAAGCCCCCAGAGAAAGGAACATTAAGTCCCCTTTGCACCCGCTGCGAACACCAGTGGCCGAAGTCACGTTCCTTAGAGCCCGCCTGGTCTGGGTCTCTGGACGACCCCCTGGGGGGTGTCCGGGTACTCAGTGTGCCTCTCTCCGCAGGGGGCATCCCGGGCCCCATCGCCTTCGGCTGGGTGATCGACAAGGCATGCCTGCTCTGGCAGAACCAGTGCGGCCAGCAGGGCTCCTGCTTCGTGTACGAGAACTCGGCCATGAGCCAGTACCTGCTTATCGCAGGGCTGGCGTACAAGGTCCTGGGCTTCATCTTCTTCACCACTGCCTGCTTCCTGTACAAGCCCCTGTCGGGGTCTTCGGATGGCCTGGAGGCTTCTCTGCCCAGCCAGTCTTCAGCCTCCGACAACCCCATGGACCTTCAGGAAGCCCCCTCAGCCCTCCAGATCCAGAGCAACATCTGA

Related Sequences

bmy_16429T0 SequenceType object (3)

Length: 790 aa      View alignments
>bmy_16429T0
MDSSRRLDRCWNSAPTPAAVAVTPSEMPQHSMGDKHFVSMPQLAFPGPPLATNSECDCTPPSRRASLGSPLSQPLCQPRPEKRGPRATQEVRYVATGRPDQACGWRAFAPTCLQAFNTPQGFLLFLCAASFLQGMTVNGFINTVVTSIERRYDLHSYQSGLIASSYDVAACLCLTFVSYFGGHGHKPRWLGWGVLVMGAGSLVFSLPHFTAGPYEAQVDEAVGTCRANRSATCGGRASGLSSYQLVFMLGQFLHGMGATPLYTLGVTYLDENVKSSYSPVYIAVFYTAAILGPAAGYLVGGALLNIYTEIGHRTELTTESPLWVGAWWVGFLGTGAAAFLIAVPILGYPRQLPGSQRYVVMRASETHQLKNSSHRVTSNPDFGKTIRDLPLSIWLLLKNPTFILLCLAGATEATLIAGMSTFGPKFLESQFSLSASEAATLFGYLVVPAGGGGTFLGGVFVNKCKLRGLGAIRCCQLCGLVSMLAFFVFFAHCPNVPMAGVTASYNGSLLPEGHLGLTAACNAACGCQPEHYSPVCGPDGLMYYSPCHAGCPEAASPGPGGQQVYRDCSCVPQNFSSGFGHATAGKCTSTCQRKPLLLVFIFVVIIFTFLSSIPALTATLRLRQSRRPWGISRHGGKPPEKGTLSPLCTRCEHQWPKSRSLEPAWSGSLDDPLGGVRVLSVPLSAGGIPGPIAFGWVIDKACLLWQNQCGQQGSCFVYENSAMSQYLLIAGLAYKVLGFIFFTTACFLYKPLSGSSDGLEASLPSQSSASDNPMDLQEAPSALQIQSNI*