Part of scaffold_1313 (Scaffold)

For more information consult the page for scaffold_1313 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLCA4 ENSTTRG00000010717 (Bottlenosed dolphin)

Gene Details

chloride channel accessory 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010166, Bottlenosed dolphin)

Protein Percentage 79.46%
cDNA percentage 83.73%
Ka/Ks Ratio 0.92817 (Ka = 0.0521, Ks = 0.0561)

CLCA4 ENSBTAG00000017357 (Cow)

Gene Details

calcium-activated chloride channel regulator 4 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023081, Cow)

Protein Percentage 84.7%
cDNA percentage 90.1%
Ka/Ks Ratio 0.44826 (Ka = 0.0846, Ks = 0.1887)

CLCA4  (Minke Whale)

Gene Details

chloride channel accessory 4

External Links

Gene match (Identifier: BACU004620, Minke Whale)

Protein Percentage 69.88%
cDNA percentage 79.54%
Ka/Ks Ratio 0.61085 (Ka = 0.22, Ks = 0.3601)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2724 bp    Location:85045..59124   Strand:-
>bmy_16487
ATGGAGTTACTCAGAAGATTTGTCTTCCTCTTGGCCCTATACCTGCTGCAGGGGTCCAATACTTCCCTTGTTCGGCTGGATAACAATGGCTACGAGGGCATTATCATTGCTATAGACCCTGCTGTGCCAGAAGATGAAACACTAATTGAACAGATAAAGGACATGGTGACTGCAGCATCTACTTATCTGTTTGAAGCCACAGAAAAAAGGTTTTTTTTCAAAAATGTATCAATATTAATTCCAGAGAACTGGAAGAACAAAACTCARTACAAGAGGCCAAAACATGAAAGCTACAAACATGCTGATGTTTTAGTCTCACCACCTACCCTCCCAGGTAGAGATGAGCCATATACCAAGCAGTTCACAGCCTGTGAAGAAAAAGGAGAATACATTCACTTCACCCTCGACTTTGTACTTGGAAAAAAACAAAAGGAATTTGGACCATCAGGTAGACTGTTTGTCCATGAGTGGGCCCATCTCCGCTGGGGAGTGTTTGATGAGTACAATGATGATGAGCCTTTCTACAGCGCTAAGTGTTCCAGAGGCATTACTGGTATAAACAGAGTGTATAAGTGTCAAGGAAACAGCTGTGTAACTAGTAGATGCAAAATTGATTCCAAGACAAAACTGTATCAAAAAGATTGTCAGTTCTTCCCTGATAAATATCAAACTGAAAAGACATCCATAATGTTTATGCAAGGTATTGATTCTGTCGCTGAATTCTGTAATGAAAAAAACCATAACCGTGAAGCTCCAAGCCTACAAAACAAAATGTGCAATTTCAGAAGCACATGGGAGGTGATCAGCAATTCTGAGGATTTTAGAAACACAATGGTTATGGTGGCACCACCCCCTCCGCCTGTCTTCTCATTGCTAAAGATCAGGGAAAGAATTGTGTGCTTAGTCCTTGATAAGTCTGGAAGCATGGGGAATTTTAATCGCCTAAATCGAATGAATCAAGCAGCAAAACATTTCCTGCTGCAGACCGTTGAAAATGGATCCTGGGTGGGGATGGTGCACTTTGAAAGTACTGCCTACATCAAAAGTAATCTAATCCAAATAATAAGCAGCCATGAAAGAAGAAAGCTCTTGGAGAGTTTACCTACAGCTGCTCGTGGAGGAACTTCCATCTGCAGTGGAATTAAATCAGGATTTCAGGTAATTAGAAATGCTTACTCCCAAATAGATGGATCTGAAATAGTGCTGCTGACTGATGGGGAGGATAGCTCTGCAAAGACTTGTATTGATGAAGTGAAACAAAGTGGGGCCATCATTCATTTTATTGCTCTGGGACCACAGGCCGATCAAGCAGTCATAGAGATGAGCAATGTAACAGATGAAGCCCAGAACAATGGCCTCATTGATGCTTTCGCGGCCCTTGCATCAGGAAACACCGATGCCTCCCAGCAGTCTCTTCAGCTTGAAAGTAAGGGATTAAAACTCAACACTGGTGGCTGGATGAACGGCACTGTAATAATTGATAGCACTGTGGGAAAGGACACATTCTTTCTCATCACATGGAACCAACAGCTTCCTGTTATTTCTCTCTTGGATCCCACTGGAAAACCAGTGGGAAATTTCACAGTGGATTCAACTTCCAAAATGGCCTATCTCAGTATTCCAGGAACTACAAAGGTGGGTGTTTGGACTTACAGTCTTCAAGCAAAAGCAAACTCAGAGACATTAACTATAACAGTAAATTCTCGAGCGGCAAAGTCTTCTGTGCCTCCGATCACGGTGAATGCTAAAATGAATAAAGACACAAACAGCTTCCCCAGCCCAATGATTGTTTATGTAGAAATTCTACAAGGGTATATACCCATTCTTGGAGCCAATGTGACTGCTTTCATTGAATCAAATAATGGGAATACAGAAGTTTTGGAACTTTTGGATAATGGTGCAGGTGCTGATTCTTTTAAGAATGATGGAGTCTACTCCAGATATTTTACAACTTTTAAAGAAAATGGCAGATATAGCTTGAAAGTACGGGCTCATGGAGGAGAAAATGCTGTCATGCGAAACTTAAGGCATCCACTGAATAGAGCTGCATATATACCAGGCTGGGTAGTGAATGGAATTTTTAATGCAGGGAACATTGAAGGGAATCCACCAAGACCTGAAATTGATGAGAACACTCAGACAAACTTGGAGAGTTTCACCAGAACAGCATCTGGAGGTGCATTTGTGGTTTCAAATGTTCCAAGTCTTCCCTCCTCGACTGACGTCTTCCCACCAAGTCAAATCACAGACCTTGAGGCCACATCAGATGAGGATGAGATCAGTCTAACATGGACAGCACCAGGAGATAATTTTGATGTTGGAAAAGTTCAAAAGTATATCATAAGAATAAGCGGAAGTATCCTGGATCTAAGAGATAATTTTGATAATGCTCTGCAAGTAAACACTACTGATCTGTTACCAAGTGAGGCCAACTCCAAGGAAACCTTTACATTCAAACCAGGAAATATCTCAGAAGAAAATGCAACCCACATATTCATTGCCATTCAAAGTGTGGATGAAAGCAATTTGACATCACAAGTATCTAACATTGCACAAGCAGCTTTGTTTGTTCCTCAAGAAGATCCCCCTACGTCCGGACTCAGCATTTCTACTTTGATGCTGTTAGTGGTTGGCACTGTGATAATTGTCAGTGTGATTTTAAGTATTACCATTTATGTCTTAAGCAAGAAAAGAAATTCTAGCAGACCTAGAACAGGGTTTTAA

Related Sequences

bmy_16487T0 Protein

Length: 908 aa      View alignments
>bmy_16487T0
MELLRRFVFLLALYLLQGSNTSLVRLDNNGYEGIIIAIDPAVPEDETLIEQIKDMVTAASTYLFEATEKRFFFKNVSILIPENWKNKTQYKRPKHESYKHADVLVSPPTLPGRDEPYTKQFTACEEKGEYIHFTLDFVLGKKQKEFGPSGRLFVHEWAHLRWGVFDEYNDDEPFYSAKCSRGITGINRVYKCQGNSCVTSRCKIDSKTKLYQKDCQFFPDKYQTEKTSIMFMQGIDSVAEFCNEKNHNREAPSLQNKMCNFRSTWEVISNSEDFRNTMVMVAPPPPPVFSLLKIRERIVCLVLDKSGSMGNFNRLNRMNQAAKHFLLQTVENGSWVGMVHFESTAYIKSNLIQIISSHERRKLLESLPTAARGGTSICSGIKSGFQVIRNAYSQIDGSEIVLLTDGEDSSAKTCIDEVKQSGAIIHFIALGPQADQAVIEMSNVTDEAQNNGLIDAFAALASGNTDASQQSLQLESKGLKLNTGGWMNGTVIIDSTVGKDTFFLITWNQQLPVISLLDPTGKPVGNFTVDSTSKMAYLSIPGTTKVGVWTYSLQAKANSETLTITVNSRAAKSSVPPITVNAKMNKDTNSFPSPMIVYVEILQGYIPILGANVTAFIESNNGNTEVLELLDNGAGADSFKNDGVYSRYFTTFKENGRYSLKVRAHGGENAVMRNLRHPLNRAAYIPGWVVNGIFNAGNIEGNPPRPEIDENTQTNLESFTRTASGGAFVVSNVPSLPSSTDVFPPSQITDLEATSDEDEISLTWTAPGDNFDVGKVQKYIIRISGSILDLRDNFDNALQVNTTDLLPSEANSKETFTFKPGNISEENATHIFIAIQSVDESNLTSQVSNIAQAALFVPQEDPPTSGLSISTLMLLVVGTVIIVSVILSITIYVLSKKRNSSRPRTGF*