Part of scaffold_1798 (Scaffold)

For more information consult the page for scaffold_1798 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CIB3 ENSTTRG00000014539 (Bottlenosed dolphin)

Gene Details

calcium and integrin binding family member 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013786, Bottlenosed dolphin)

Protein Percentage 91.02%
cDNA percentage 93.21%
Ka/Ks Ratio 0.3423 (Ka = 0.0522, Ks = 0.1526)

CIB3 ENSBTAG00000016179 (Cow)

Gene Details

calcium and integrin-binding family member 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021537, Cow)

Protein Percentage 89.82%
cDNA percentage 88.82%
Ka/Ks Ratio 0.13871 (Ka = 0.0594, Ks = 0.4283)

CIB3  (Minke Whale)

Gene Details

calcium and integrin binding family member 3

External Links

Gene match (Identifier: BACU010319, Minke Whale)

Protein Percentage 92.81%
cDNA percentage 93.81%
Ka/Ks Ratio 0.28595 (Ka = 0.0438, Ks = 0.1533)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 588 bp    Location:113253..108738   Strand:-
>bmy_18562
ATGGGCAACAAGCAAACAGTCTTTACTCATGAGCAGCTGGAAGCATATCAGGTAGGGGTGATGGGCCGGGCCCTCGGTGGGTTTGGCAGCCTTGGTTTCCTGGCCCAAGAAATGGGGACAGCATCCCTTCGTCCTGGGTGTGCAGTCAGCAAGCGTTCTGGGGCGGCTCTGCTCTTCTATCGCTACCAGGACCTTGCCCCCCAGCTTGTCCCTCTCGACTATACCAGCTACCCTCATGTGAAGGTTCCCTACGAGCTCATTGGCAGCATGCCTGAGCTGAAGGACAACCCTTTCCGTCAGAGGATCGCCCAGGTCTTCTCYGAGGATGGGGATGGCCACATGACCTTGGACAACTTCTTGGACATGTTTTCTGTGATGAGTGAAATGGCTCCCCGCGACCTCAAAGCCTACTACGCTTTTAAAATTTATGGTACAGTGACCCAGCTAACGCGGGGAGAGCTGAGCGCTGAGGAGGTGAGCCTGGTGTGTGAGAAGGTGCTGGATGAGGCCGATGGGGACCACGACGGGCGACTGTCCCTGGAAGACTTCCAGAACATGATCCTGCGGGCGCCGGACTTCCTCAGGTGA

Related Sequences

bmy_18562T0 Protein

Length: 196 aa      View alignments
>bmy_18562T0
MGNKQTVFTHEQLEAYQVGVMGRALGGFGSLGFLAQEMGTASLRPGCAVSKRSGAALLFYRYQDLAPQLVPLDYTSYPHVKVPYELIGSMPELKDNPFRQRIAQVFSEDGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYGTVTQLTRGELSAEEVSLVCEKVLDEADGDHDGRLSLEDFQNMILRAPDFLR*