Sequence detailsbmy_20247 (Coding sequence)

Part of scaffold_2374 (SequenceType object (1))

For more information consult the page for scaffold_2374 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TTC12ENSTTRG00000010956 (Bottlenosed dolphin)

Gene Details

tetratricopeptide repeat domain 12

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000010423, Bottlenosed dolphin)

Protein Percentage 83.66%
cDNA percentage 85.22%
Ka/Ks Ratio 0.50553 (Ka = 0.0828, Ks = 0.1638)

TTC12ENSBTAG00000010008 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000013201, Cow)

Protein Percentage 82.6%
cDNA percentage 85.78%
Ka/Ks Ratio 0.38821 (Ka = 0.1189, Ks = 0.3063)

TTC12 (Minke Whale)

Gene Details

tetratricopeptide repeat domain 12

External Links

Gene match (Identifier: BACU004012, Minke Whale)

Protein Percentage 89.86%
cDNA percentage 92.03%
Ka/Ks Ratio 0.76278 (Ka = 0.0798, Ks = 0.1046)

Additional orthologs identified in other species via the OPTIC pipeline.

TTC12 (Human)   Ttc12 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1986 bp    Location:279680..227514   Strand:-
Raw sequence 
>bmy_20247
ATGGCTGACTATCAAGAGGAAGACTTGCAGAAATTTCTTAAAAATGTAGACGAAATCACCAATTTAATTCAGGAGATGAATTCTGATGACCCAGTCGTACGAGAGAAAGCTGTCCTCGAGACAGAAAAGAGACTGCAGTTTACAGAGGAAGACCAAGAGGAGGACGAGTGCAGGACCACCGTGAACAAGACCATGATCAGTCCTCCACAAGCTCCCACAAAGAACACAGATGAAGTAAACACAGAGGCCTTCTTGGCATCTATGGAGAAGGATGCAAAAGAACGTGCCAAAAGAAGAAGGGAAAACAAAGTCTTAGCAGATGCCCTAAAAGAAAAGGGGAATGAAGCATTTGTCAAAGGTGATTATGAAACAGCCATCCTGTGCTACAGTGAGGGTTTGGAGAAGCTGAAGGACGTGAAAGTACTGTACACCAACCGAGCCCAGGCTTATATCAAACTTGGGGACTACCGGAAGGCACTGGTGGATTGTGAGTGGGCTCTGAAGTGGCTCACCCTTCACTGTTGTGTTATCAGTTCCATCCTCTGTGAGTTCTCCAGGCTTCACTCCACAGCTCCCTGCCTTTCTTCCTCCTACAGTTTCTCCCTCCAAGCTCTCGTCTCCTCTGATTACCTGAATCAGGTAGATCTTCGGGAGAAAGCAGACCTTCAAGAGAAGGAAGCCCAGGAAGCACTGGATTCAGGAACTAACACAGCCGTGACGACCAAGAATCTTCTGGAGATTCTTTCCAAGCCTGATCAGATCCCCTCGTTCTATGCAGGGGGAATTGAAATCCTGACTGACATGATGAAAGACTGCACGGAACGAACTTTATTCAGAACACACGATGGATTCAGTATCATCAGTGAGAATGAGGTCATAAGAAGGTGCTTTTCCACAGCAGGAAAAGATGCAGTGGAAGAGACAGTATGCATGTCTGTTCTCAGGCTCTGGCAAGCGGTGTGCAGTGAGAACGAGGAGAACCAACGTCTACTTGTGCTGCGCCCCGACACGGGCCACCTGCTGCCCTCCCTCTTGGCCTCCAGGGTCCCAAACATCCGGCAGCAGACCCTGGCCCTGCTGCTGCAGCTCGCCCAGACGGAGAATGGACGGAGCCTGATCATGGGGCACCTTGACCTGACCGGGTTGTTGGAAGCCCTCGTGTCGTTTCTTGATTTCTCAGATAAAAAGGCCAACTCAGCCATGGGACTGCTCACAGACTTGGCTCTGGAAGAAAGATTCCAAGTCTGGTTCCAGGCCAGCCTTCCGGATGTTCTCCTGGCACTGACGGGCGTGCTGAAGAGAGATCCCAAGGTCACCAACACCTCAGCTCTCTGCCAGTGTATTGCCATTATGGGAAACCTCAGCGCTGAGGCTGCCACCCGAAGACAGATGTCTGCCTCTGAAGAATTCAGGGATGCCTGCTTGGGCCTCATGGCCAAGTGTGAGGAGGATGTGGACCTGTTCAGAGAGGTCATGTATACCCTCCTGGGACTCATGATGAACTTGTGTCTTCAGTCCCCCTGTGTCTCTGAGGTTTGGGCCATGGAGGTGAGCAGGAAGTGCCTGTCTCTACTGAACAGCCAGGACGGAGGAATCCTCACAGCAGGAGGCCAGACTGCGTCACGTTATGCGGTAAAGATACTCGCCATCTGCACTAATAGTTATCACGAAGCTCGAGGAGAGCTGATAAGACTGGATAAAAAGCTCGGTGTCCTGATGCAGCTGCTGGGCTCGGAGGATGAGATTCTGGTGGGCAACGCCACCCTCTGCCTGGGGAACTGCATGGAGGTGCCACACGTTGCCTCATCCCTGCTGACCACGGACATCGTGCCGGTCTTGCTGAAGCTCGCGGGCGGCGACGCGCAGAAGACGGCCGTGCAGCTGAACGCGGGCATCGCCCTGGGGAAGCTGTGCACGGCCGAGCCCAGCAAAAGTTCTCATTTTCTAAATGCGTTGAAAATACGGGCTCTTCAGAGGGCCCAGTAA

Related Sequences

bmy_20247T0 SequenceType object (3)

Length: 662 aa      View alignments
>bmy_20247T0
MADYQEEDLQKFLKNVDEITNLIQEMNSDDPVVREKAVLETEKRLQFTEEDQEEDECRTTVNKTMISPPQAPTKNTDEVNTEAFLASMEKDAKERAKRRRENKVLADALKEKGNEAFVKGDYETAILCYSEGLEKLKDVKVLYTNRAQAYIKLGDYRKALVDCEWALKWLTLHCCVISSILCEFSRLHSTAPCLSSSYSFSLQALVSSDYLNQVDLREKADLQEKEAQEALDSGTNTAVTTKNLLEILSKPDQIPSFYAGGIEILTDMMKDCTERTLFRTHDGFSIISENEVIRRCFSTAGKDAVEETVCMSVLRLWQAVCSENEENQRLLVLRPDTGHLLPSLLASRVPNIRQQTLALLLQLAQTENGRSLIMGHLDLTGLLEALVSFLDFSDKKANSAMGLLTDLALEERFQVWFQASLPDVLLALTGVLKRDPKVTNTSALCQCIAIMGNLSAEAATRRQMSASEEFRDACLGLMAKCEEDVDLFREVMYTLLGLMMNLCLQSPCVSEVWAMEVSRKCLSLLNSQDGGILTAGGQTASRYAVKILAICTNSYHEARGELIRLDKKLGVLMQLLGSEDEILVGNATLCLGNCMEVPHVASSLLTTDIVPVLLKLAGGDAQKTAVQLNAGIALGKLCTAEPSKSSHFLNALKIRALQRAQ*