Sequence detailsbmy_20898 (Coding sequence)

Part of scaffold_2672 (SequenceType object (1))

For more information consult the page for scaffold_2672 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ABCB10ENSTTRG00000009696 (Bottlenosed dolphin)

Gene Details

ATP-binding cassette, sub-family B (MDR/TAP), member 10

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000009191, Bottlenosed dolphin)

Protein Percentage 83.12%
cDNA percentage 83.54%
Ka/Ks Ratio 0.26704 (Ka = 0.0072, Ks = 0.0271)

ABCB10ENSBTAG00000017053 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000022677, Cow)

Protein Percentage 93.0%
cDNA percentage 91.98%
Ka/Ks Ratio 0.17112 (Ka = 0.0373, Ks = 0.2182)

ABCB10 (Minke Whale)

Gene Details

ATP-binding cassette, sub-family B (MDR/TAP), member 10

External Links

Gene match (Identifier: BACU009567, Minke Whale)

Protein Percentage 99.62%
cDNA percentage 98.85%
Ka/Ks Ratio 0.05645 (Ka = 0.0019, Ks = 0.0344)

Additional orthologs identified in other species via the OPTIC pipeline.

ABCB10 (Human)   Abcb10 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1674 bp    Location:222380..191355   Strand:-
Raw sequence 
>bmy_20898
ATGGCTGCCGGGCGCTCGGAGGCCCAGAAGCTCCTAAGGCTGGCGCAGCCCGAGCGCCGGAGGCTGGCAGCTGCAGTTGGGTTTCTGACGGTGTCCAGTGTCATCACCATGTCCGCCCCCTTCTTCCTGGGGAAGATAATCGACGTCATTTACACAAACCCCTCTGCGGACTACAGCTCCAGCCTGACCAGCCTCTGCCTGGCGCTCGGCGGCGTGTTCCTGTGTGGCGCCGCGGCCAACGCCGTCCGCGTCTACCTCATGCAGACGTCAGGTCAGCGCATCGTGAATAGGTTGAGAGCTTCGCTCTTTTCCTCGGTTCTGAGGCAGGAGGTCGCTTTCTTTGACAAGACGCGCACCGGAGAGCTGATCAACCGCCTGTCCTCGGACGCGGCCCTGCTGGGGCGCTCGGTGACCGAGAACCTCTCGGACGGGCTCAGGGCCGGAGCCCAGGCTTCCATTGGCGTTGCCATGATGTTTTTTGTCTCCCCTAATCTGGCCACTTTCGTTTTGAGTGTGGTGCCTCCAATATCCATCCTTGCTGTGCTTTATGGCCGATACCTACGGAAACTGACCAAAGTCACTCAGGACTCCCTGGCACAAGCCACTCAGCTAGCTGAGGAACGTATTGGAAATATAAGAACTGTTAGAGCTTTTGGGAAAGAAATGACTGAAATAGAGAAATACACCAGCAAAGTGGACCATGTGATGCAGTTAGCAAGGAAAGAGGCATTTGCTCGGGCTGGCTTCTTTGGAGCAACCGGGCTCTCTGGGAACCTGATCGTGCTTTCTGTCCTGTACAAAGGAGGGCTGCTGATGGGCAGTGCCCACATGACAGTGGGTGAACTCTCTTCCTTCCTAATGTATGCTTTCTGGGTTGGATTAAGCATTGGAGAGGGGGCCATTTTAAACGAGAAGAGCTTCCAGGGCGCTTTGGAGTTCAAGAACGTGCATTTCGCCTATCCAGCTCGCCCAGAGGTGCCCATATTCCAGGATTTCAGCCTTTCTATCCCAGCAGGATCCATCACAGCGCTGGTTGGCCCAAGTGGTTCTGGCAAATCAACAGTGATTTCTCTCCTGCTGAGGTTGTACGACCCCAGCGCTGGAACGATCAGTCTTGATGGCCGTGACATCCGTCAGCTAAATCCAGTCTGGCTGAGATCCAAGATTGGGACAGTGAGTCAGGAACCAATTTTGTTTTCTTGCTCAATTGCGGAGAACATTGCCTATGGTGCAGACGACCCTTCCTCGGTGACAGCCGAGCAGGTAGAGAAAGTGGCTGGTGTAGCCAATGCAGCTGCTTTCATCCGACATTTCCCTCAAGGGTTCAACACTGTGGTCGGAGAAAAGGGCATTCTCCTCTCAGGTGGGCAGAAACAACGAATTGCAATTGCCCGTGCTCTGCTTAAGAATCCCAGAATTCTTCTCCTAGATGAAGCAACCAGCGCACTGGATGCTGAAAACGAGTACCTCGTTCAGCAAGCTCTGGATCGACTGATGGAAGGAAGGACGGTGTTCATCATCGCCCATCGTCTGTCCACCATTAAGAATGCCAATATGGTAGCTGTCCTTGACCAGGGGAAGATCACCGAGTGTGGGAAACACGAAGAACTGCTTTCGAAACCAGACGGGATATACAGGAAATTAATGAATAAACAGAGTTTTATTTCAGCATAA

Related Sequences

bmy_20898T0 SequenceType object (3)

Length: 558 aa      View alignments
>bmy_20898T0
MAAGRSEAQKLLRLAQPERRRLAAAVGFLTVSSVITMSAPFFLGKIIDVIYTNPSADYSSSLTSLCLALGGVFLCGAAANAVRVYLMQTSGQRIVNRLRASLFSSVLRQEVAFFDKTRTGELINRLSSDAALLGRSVTENLSDGLRAGAQASIGVAMMFFVSPNLATFVLSVVPPISILAVLYGRYLRKLTKVTQDSLAQATQLAEERIGNIRTVRAFGKEMTEIEKYTSKVDHVMQLARKEAFARAGFFGATGLSGNLIVLSVLYKGGLLMGSAHMTVGELSSFLMYAFWVGLSIGEGAILNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPAGSITALVGPSGSGKSTVISLLLRLYDPSAGTISLDGRDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEQVEKVAGVANAAAFIRHFPQGFNTVVGEKGILLSGGQKQRIAIARALLKNPRILLLDEATSALDAENEYLVQQALDRLMEGRTVFIIAHRLSTIKNANMVAVLDQGKITECGKHEELLSKPDGIYRKLMNKQSFISA*