Part of scaffold_2931 (Scaffold)

For more information consult the page for scaffold_2931 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC10A1 ENSTTRG00000003320 (Bottlenosed dolphin)

Gene Details

solute carrier family 10 (sodium/bile acid cotransporter family), member 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003115, Bottlenosed dolphin)

Protein Percentage 67.54%
cDNA percentage 69.44%
Ka/Ks Ratio 1.95006 (Ka = 0.0303, Ks = 0.0155)

SLC10A1 ENSBTAG00000001881 (Cow)

Gene Details

sodium/bile acid cotransporter

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002446, Cow)

Protein Percentage 87.28%
cDNA percentage 90.94%
Ka/Ks Ratio 0.34122 (Ka = 0.0679, Ks = 0.1991)

SLC10A1  (Minke Whale)

Gene Details

solute carrier family 10 (sodium/bile acid cotransporter), member 1

External Links

Gene match (Identifier: BACU010771, Minke Whale)

Protein Percentage 97.96%
cDNA percentage 97.96%
Ka/Ks Ratio 0.26561 (Ka = 0.012, Ks = 0.0453)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 687 bp    Location:146219..158067   Strand:+
>bmy_21367
ATGACCACCTGCTCTACCTTCTTTGCCCTGGGCATGATGCCCCTCCTCCTGTACGTTTACTCCAGGGGCATCTATGATGGGACCCTGAAGGACAAGGTGCCCTATGGCGGCATCATCATATCACTGATCCTGATTCTCATTCCTTGCACCATAGGCATCATCCTCAAATCCAAACGGCCACAATACGTACGTTATGTCACCAAGGGAGGGATGATCCTCCTGCTTTTGTGCAGTGTGGCTGTCGTAGTGCTCTCTGTCCTCAATGTGGGCAAGAGCATTTTGTTTGTCATGACACCACACTTGCTGGCCACCTCCTCCCTGATGCCTTTCATTGGCTTCCTGCTAGGCTACGTTCTCTCTGCTCTGTTCCGCCTCAACAGACGGTGCAGACGCACCGTCAGCATGGAGACTGGATGCCAAAATATTCAACTCTGCTCCACCATCCTCAACGTGACCTTCCCCCCTGAAGTCATTGGACCACTTTTCTTCTTTCCTCTCCTCTATATGATTTTCCAGCTTGGAGAAGGGCTTCTCCTCATTGCCATCTTTCGGTGCTATGAGAAAATCAAGCCTTCCAAGCATAAAACAGAAATGATCTACAAAGCTGACACAACTGAAGAAACCCTTCCAACAGCTCTGGGAAATGGCACCCACGAAGGGGAGGCGTGCCCCCCTTACACAGCCTAG

Related Sequences

bmy_21367T0 Protein

Length: 229 aa      View alignments
>bmy_21367T0
MTTCSTFFALGMMPLLLYVYSRGIYDGTLKDKVPYGGIIISLILILIPCTIGIILKSKRPQYVRYVTKGGMILLLLCSVAVVVLSVLNVGKSILFVMTPHLLATSSLMPFIGFLLGYVLSALFRLNRRCRRTVSMETGCQNIQLCSTILNVTFPPEVIGPLFFFPLLYMIFQLGEGLLLIAIFRCYEKIKPSKHKTEMIYKADTTEETLPTALGNGTHEGEACPPYTA*