Part of scaffold_2940 (Scaffold)

For more information consult the page for scaffold_2940 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

UBFD1 ENSTTRG00000005257 (Bottlenosed dolphin)

Gene Details

ubiquitin family domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004952, Bottlenosed dolphin)

Protein Percentage 98.38%
cDNA percentage 98.6%
Ka/Ks Ratio 0.24838 (Ka = 0.0075, Ks = 0.0301)

UBFD1 ENSBTAG00000046033 (Cow)

Gene Details

ubiquitin domain-containing protein UBFD1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000054954, Cow)

Protein Percentage 91.18%
cDNA percentage 89.98%
Ka/Ks Ratio 0.17268 (Ka = 0.0551, Ks = 0.319)

UBFD1  (Minke Whale)

Gene Details

ubiquitin family domain containing 1

External Links

Gene match (Identifier: BACU018199, Minke Whale)

Protein Percentage 98.88%
cDNA percentage 98.63%
Ka/Ks Ratio 0.21506 (Ka = 0.007, Ks = 0.0324)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 930 bp    Location:7659..19317   Strand:+
>bmy_21415
ATGGCGGCGGCCGGAGCCCCGGATGGCATGGAGGAAACTGGCATGGATACGGAGGCCGAGACCGTGGCGACCGAGGGGCCCGCGCGGCCCCTCAACTGCTTGGAGGCCGAAGCCGCGGCGGGGGCGGCGGCCGAGGACTCCTGCGCCGCGCGAGGCAGTCTGCAGCCTGCCCCGGCCCAGCCCCCTGGGGAYCTCGCGGCCCAGGCCTCGGTCAGCAACGGCGAGGACGCGGGCGGCGGCGCGGGCAGGGAGCTGGTGGACCTGAAGATCATCTGGAACAAGACTAAGCACGACGTGAAGTTTCCCCTGGATAGCACAGGCTCCGAGCTAAAACAGAAGATTCACTCGATTACAGGTCTCCCGCCTGCCATGCAGAAAGTCATGTATAAGGGACTTGTCCCTGAGGATAAGACGTTGAGAGAAATAAAAGTCACCAGTGGAGCCAAGATCATGGTGGTTGGCTCCACGATAAATGATGTTTTAGCAGTAAACACACCCAAAGATGCTGCCCAGCAGGACGCAAAGGCCGAAGAGAACAAGAAGGAGCCTCTCTGCAGGCAGAAACAACACAGGAAAGTGTTGGATAAAGGAAAACCTGAAGATGTGATGCCGTCTGTTAAGGGTGCCCAGGAGCGCCTGCCAGCTGTACCCTTATCCGGCATGTACAATAAGTCCGGGGGAAAAGTGAGACTTACCTTTAAGCTAGAACAAGACCAGCTGTGGATCGGCACTAAAGAGCGGACTGAGAAATTGCCCATGGGTTCCATTAAAAATGTGGTCAGTGAACCTATCGAAGGACACGAAGACTACCACATGATGGCGTTTCAGTTGGGCCCCACGGAAGCCTCTTACTACTGGGTGTACTGGGTTCCAACTCAATATGTGGATGCAATCAAAGACACTGTGCTGGGGAAATGGCAGTATTTTTGA

Related Sequences

bmy_21415T0 Protein

Length: 310 aa      View alignments
>bmy_21415T0
MAAAGAPDGMEETGMDTEAETVATEGPARPLNCLEAEAAAGAAAEDSCAARGSLQPAPAQPPGDLAAQASVSNGEDAGGGAGRELVDLKIIWNKTKHDVKFPLDSTGSELKQKIHSITGLPPAMQKVMYKGLVPEDKTLREIKVTSGAKIMVVGSTINDVLAVNTPKDAAQQDAKAEENKKEPLCRQKQHRKVLDKGKPEDVMPSVKGAQERLPAVPLSGMYNKSGGKVRLTFKLEQDQLWIGTKERTEKLPMGSIKNVVSEPIEGHEDYHMMAFQLGPTEASYYWVYWVPTQYVDAIKDTVLGKWQYF*