Part of scaffold_4735 (Scaffold)

For more information consult the page for scaffold_4735 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LYPD4 ENSTTRG00000008264 (Bottlenosed dolphin)

Gene Details

LY6/PLAUR domain containing 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007823, Bottlenosed dolphin)

Protein Percentage 90.86%
cDNA percentage 93.4%
Ka/Ks Ratio 0.60019 (Ka = 0.0284, Ks = 0.0473)

LYPD4 ENSBTAG00000020251 (Cow)

Gene Details

Ly6/PLAUR domain-containing protein 4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026978, Cow)

Protein Percentage 80.71%
cDNA percentage 86.97%
Ka/Ks Ratio 0.4427 (Ka = 0.1129, Ks = 0.255)

LYPD4  (Minke Whale)

Gene Details

LY6/PLAUR domain containing 4

External Links

Gene match (Identifier: BACU002068, Minke Whale)

Protein Percentage 96.39%
cDNA percentage 98.45%
Ka/Ks Ratio 1.16478 (Ka = 0.0164, Ks = 0.0141)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 591 bp    Location:11886..13277   Strand:+
>bmy_22632
ATGAGGAGCATGGTGTGTAAACTGAATGAGGGCTGTGAGGAGACGCTGGTGTTCATCGAGACAGGGACCAAAAGGGGAATTGTGGGTTTTAAAGGCTGCAGCCCAGCTTCATCTTACCCCCCGCAAGTCTCCTACCTCGTTTCACCGCCCGGATTGTCCATTGCCTCCTATAGCCGCGTCTGCCGGACATACCTCTGCAATAACCTCACCAACATGGATCATTTTGGGAAACTCAAGGCCAAGGCTCCTAAGACTGTAGCATCTTCTTCCCATAGTTGCCCAACCTGTGTGGGCGAGCACTCTAAGGACTGCCTCCCAAATTTTGTCACCACCGAGGCTTGCCCCGAGAATGCCACTGAGTGTTACAGTTCCACCTTAAAATTTCAGGCAGGGTCTCTCAATACCACCTTCCTCCTCATGGGCTGTGCTCGTGAATACACCGATATTTTAGCCCACTTTCACCATATTGGCAGCATCAGAGTGACTGAGGTCATCAACATCTTAGAGAAGGCCCAGTTTGCTGGTGCAGAGCCCTCTAGTCGGAGACCTGCTTGGGGCATCCTCTTAGGCCTCCTGTTTGCCTTCAGAGAC

Related Sequences

bmy_22632T0 Protein

Length: 197 aa      View alignments
>bmy_22632T0
MRSMVCKLNEGCEETLVFIETGTKRGIVGFKGCSPASSYPPQVSYLVSPPGLSIASYSRVCRTYLCNNLTNMDHFGKLKAKAPKTVASSSHSCPTCVGEHSKDCLPNFVTTEACPENATECYSSTLKFQAGSLNTTFLLMGCAREYTDILAHFHHIGSIRVTEVINILEKAQFAGAEPSSRRPAWGILLGLLFAFRD